More than 300 homologs were found in PanDaTox collection
for query gene Franean1_6243 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_6243  short-chain dehydrogenase/reductase SDR  100 
 
 
248 aa  496  1e-139  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6958  short-chain dehydrogenase/reductase SDR  80.52 
 
 
267 aa  398  9.999999999999999e-111  Frankia sp. EAN1pec  Bacteria  normal  normal  0.605436 
 
 
-
 
NC_008726  Mvan_3777  short-chain dehydrogenase/reductase SDR  47.92 
 
 
246 aa  209  4e-53  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.603966 
 
 
-
 
NC_009338  Mflv_2757  short-chain dehydrogenase/reductase SDR  47.9 
 
 
246 aa  206  2e-52  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.8573 
 
 
-
 
NC_009077  Mjls_3405  short-chain dehydrogenase/reductase SDR  45.12 
 
 
246 aa  199  3.9999999999999996e-50  Mycobacterium sp. JLS  Bacteria  normal  normal  0.772329 
 
 
-
 
NC_008705  Mkms_3457  short-chain dehydrogenase/reductase SDR  45.12 
 
 
246 aa  199  3.9999999999999996e-50  Mycobacterium sp. KMS  Bacteria  normal  0.678887  normal  0.189586 
 
 
-
 
NC_008146  Mmcs_3395  short-chain dehydrogenase/reductase SDR  45.12 
 
 
255 aa  198  5e-50  Mycobacterium sp. MCS  Bacteria  normal  0.746696  n/a   
 
 
-
 
NC_009427  Saro_3772  short-chain dehydrogenase/reductase SDR  42.8 
 
 
246 aa  175  6e-43  Novosphingobium aromaticivorans DSM 12444  Bacteria  hitchhiker  0.00117266  n/a   
 
 
-
 
NC_010172  Mext_1326  short-chain dehydrogenase/reductase SDR  40.56 
 
 
254 aa  160  1e-38  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.393683 
 
 
-
 
NC_011757  Mchl_1526  short-chain dehydrogenase/reductase SDR  40.16 
 
 
254 aa  159  6e-38  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000395  3-oxoacyl-[acyl-carrier protein] reductase  37.55 
 
 
252 aa  155  8e-37  Vibrio sp. Ex25  Bacteria  normal  0.36672  n/a   
 
 
-
 
NC_008752  Aave_1551  short-chain dehydrogenase/reductase SDR  42.57 
 
 
270 aa  154  1e-36  Acidovorax citrulli AAC00-1  Bacteria  normal  0.2513  normal  0.363007 
 
 
-
 
NC_009511  Swit_3324  short-chain dehydrogenase/reductase SDR  44.9 
 
 
248 aa  154  2e-36  Sphingomonas wittichii RW1  Bacteria  normal  0.057049  hitchhiker  0.000702749 
 
 
-
 
NC_009457  VC0395_A1193  short chain dehydrogenase/reductase family oxidoreductase  38.02 
 
 
252 aa  150  1e-35  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009427  Saro_3738  short-chain dehydrogenase/reductase SDR  38.49 
 
 
253 aa  151  1e-35  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1897  short-chain dehydrogenase/reductase SDR  41.22 
 
 
247 aa  149  3e-35  Meiothermus ruber DSM 1279  Bacteria  normal  hitchhiker  0.00100219 
 
 
-
 
NC_013525  Tter_0268  short-chain dehydrogenase/reductase SDR  39.27 
 
 
250 aa  149  5e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009832  Spro_2063  short-chain dehydrogenase/reductase SDR  37.14 
 
 
251 aa  147  1.0000000000000001e-34  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0113  short-chain dehydrogenase/reductase SDR  40.41 
 
 
262 aa  147  2.0000000000000003e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.351696  n/a   
 
 
-
 
NC_013411  GYMC61_2515  short-chain dehydrogenase/reductase SDR  40.82 
 
 
250 aa  144  9e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009718  Fnod_0313  3-oxoacyl-(acyl-carrier-protein) reductase  38.11 
 
 
239 aa  142  5e-33  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.00087118  n/a   
 
 
-
 
NC_009511  Swit_0305  short-chain dehydrogenase/reductase SDR  40.56 
 
 
248 aa  142  7e-33  Sphingomonas wittichii RW1  Bacteria  normal  0.21038  normal 
 
 
-
 
NC_009523  RoseRS_1362  short-chain dehydrogenase/reductase SDR  39.15 
 
 
257 aa  141  8e-33  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4552  short-chain dehydrogenase/reductase SDR  38.62 
 
 
246 aa  140  9.999999999999999e-33  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0533  short chain dehydrogenase  38.96 
 
 
257 aa  140  1.9999999999999998e-32  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_4469  short-chain dehydrogenase/reductase SDR  34.12 
 
 
293 aa  140  1.9999999999999998e-32  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009921  Franean1_3581  short-chain dehydrogenase/reductase SDR  39.37 
 
 
268 aa  140  1.9999999999999998e-32  Frankia sp. EAN1pec  Bacteria  normal  normal  0.347702 
 
 
-
 
NC_009954  Cmaq_1385  short-chain dehydrogenase/reductase SDR  35.46 
 
 
248 aa  139  3.9999999999999997e-32  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
NC_013501  Rmar_2034  short-chain dehydrogenase/reductase SDR  40.16 
 
 
256 aa  139  4.999999999999999e-32  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4009  short-chain dehydrogenase/reductase SDR  37.04 
 
 
240 aa  139  4.999999999999999e-32  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_5467  short-chain dehydrogenase/reductase SDR  38.37 
 
 
305 aa  139  6e-32  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0104  short-chain dehydrogenase/reductase SDR  38.62 
 
 
246 aa  138  7e-32  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.650868  normal 
 
 
-
 
NC_008786  Veis_2457  short-chain dehydrogenase/reductase SDR  38.21 
 
 
265 aa  138  7.999999999999999e-32  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5056  short-chain dehydrogenase/reductase SDR  38.87 
 
 
249 aa  138  8.999999999999999e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A0950  short chain dehydrogenase  36.73 
 
 
256 aa  137  1e-31  Yersinia pestis Angola  Bacteria  normal  0.477872  normal 
 
 
-
 
NC_010465  YPK_3420  short chain dehydrogenase  36.73 
 
 
256 aa  137  1e-31  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0769277  n/a   
 
 
-
 
NC_009708  YpsIP31758_3287  short chain dehydrogenase  36.73 
 
 
256 aa  137  1e-31  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2773  short-chain dehydrogenase/reductase SDR  38.15 
 
 
253 aa  138  1e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4011  short-chain dehydrogenase/reductase SDR  38.71 
 
 
244 aa  137  2e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008697  Noca_4841  short-chain dehydrogenase/reductase SDR  39.29 
 
 
258 aa  136  3.0000000000000003e-31  Nocardioides sp. JS614  Bacteria  normal  0.166683  normal 
 
 
-
 
NC_009485  BBta_3549  3-oxoacyl-acyl carrier protein reductase  41.25 
 
 
248 aa  135  4e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_2798  short-chain dehydrogenase/reductase SDR  37.75 
 
 
256 aa  135  4e-31  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_007005  Psyr_0904  Short-chain dehydrogenase/reductase SDR  35.77 
 
 
254 aa  135  5e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1648  short-chain dehydrogenase/reductase SDR  38.02 
 
 
269 aa  135  5e-31  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.157293  normal 
 
 
-
 
NC_013037  Dfer_0261  short-chain dehydrogenase/reductase SDR  33.73 
 
 
285 aa  135  6.0000000000000005e-31  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.566144  normal 
 
 
-
 
NC_010483  TRQ2_1110  3-oxoacyl-(acyl-carrier-protein) reductase  36.9 
 
 
246 aa  135  6.0000000000000005e-31  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0298  sorbitol dehydrogenase  35.41 
 
 
262 aa  135  6.0000000000000005e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.514875  normal 
 
 
-
 
NC_011894  Mnod_2723  short-chain dehydrogenase/reductase SDR  35.8 
 
 
251 aa  135  7.000000000000001e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0974  short-chain dehydrogenase/reductase SDR  38.25 
 
 
254 aa  135  7.000000000000001e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1373  3-oxoacyl-(acyl-carrier-protein) reductase  37.1 
 
 
248 aa  135  7.000000000000001e-31  Spirosoma linguale DSM 74  Bacteria  normal  0.124306  normal 
 
 
-
 
NC_002936  DET0736  short chain dehydrogenase/reductase family oxidoreductase  36.96 
 
 
264 aa  135  8e-31  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00191984  n/a   
 
 
-
 
NC_010718  Nther_2742  3-oxoacyl-(acyl-carrier-protein) reductase  35.1 
 
 
246 aa  134  9e-31  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013158  Huta_0868  short-chain dehydrogenase/reductase SDR  37.5 
 
 
263 aa  134  9.999999999999999e-31  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_013441  Gbro_3568  short-chain dehydrogenase/reductase SDR  40.39 
 
 
253 aa  134  9.999999999999999e-31  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0323  short-chain dehydrogenase/reductase SDR  36.76 
 
 
269 aa  134  1.9999999999999998e-30  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1990  short-chain dehydrogenase/reductase SDR  37.4 
 
 
249 aa  134  1.9999999999999998e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4175  short-chain dehydrogenase/reductase SDR  35.16 
 
 
258 aa  133  1.9999999999999998e-30  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4159  short-chain dehydrogenase/reductase SDR  39.84 
 
 
256 aa  133  1.9999999999999998e-30  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.346824  n/a   
 
 
-
 
NC_008146  Mmcs_0334  short-chain dehydrogenase/reductase SDR  36.76 
 
 
269 aa  134  1.9999999999999998e-30  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3569  short-chain dehydrogenase/reductase SDR  37.6 
 
 
257 aa  133  1.9999999999999998e-30  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2608  short-chain dehydrogenase/reductase SDR  41.08 
 
 
254 aa  134  1.9999999999999998e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  0.575966  n/a   
 
 
-
 
NC_008705  Mkms_0344  short-chain dehydrogenase/reductase SDR  36.76 
 
 
269 aa  134  1.9999999999999998e-30  Mycobacterium sp. KMS  Bacteria  normal  normal  0.444272 
 
 
-
 
NC_013093  Amir_2079  short chain dehydrogenase  37.55 
 
 
255 aa  133  1.9999999999999998e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
BN001304  ANIA_07806  Versicolorin reductase (EC 1.1.-.-) [Source:UniProtKB/Swiss-Prot;Acc:Q00791]  34.25 
 
 
264 aa  133  3e-30  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00450533  normal  0.460888 
 
 
-
 
NC_009455  DehaBAV1_0666  short-chain dehydrogenase/reductase SDR  36.29 
 
 
265 aa  133  3e-30  Dehalococcoides sp. BAV1  Bacteria  unclonable  0.00000000369604  n/a   
 
 
-
 
NC_009512  Pput_3743  short-chain dehydrogenase/reductase SDR  40.49 
 
 
254 aa  133  3e-30  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2616  short chain dehydrogenase  38.15 
 
 
258 aa  133  3e-30  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_1020  3-oxoacyl-(acyl-carrier-protein) reductase  36.51 
 
 
246 aa  133  3e-30  Thermotoga petrophila RKU-1  Bacteria  normal  0.0122832  n/a   
 
 
-
 
NC_011661  Dtur_1771  short-chain dehydrogenase/reductase SDR  34 
 
 
252 aa  133  3e-30  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2468  Short-chain dehydrogenase/reductase SDR  37.86 
 
 
254 aa  132  3.9999999999999996e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012029  Hlac_1094  short-chain dehydrogenase/reductase SDR  40 
 
 
257 aa  132  3.9999999999999996e-30  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_013730  Slin_3152  short-chain dehydrogenase/reductase SDR  36.69 
 
 
250 aa  132  3.9999999999999996e-30  Spirosoma linguale DSM 74  Bacteria  normal  0.182399  normal 
 
 
-
 
NC_009338  Mflv_1905  short-chain dehydrogenase/reductase SDR  35.51 
 
 
267 aa  132  5e-30  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.958829  normal  0.189609 
 
 
-
 
NC_009656  PSPA7_6322  putative short-chain dehydrogenase  36.25 
 
 
252 aa  132  5e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_72840  putative short-chain dehydrogenase  36.25 
 
 
252 aa  132  5e-30  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.118155  normal 
 
 
-
 
NC_008825  Mpe_A2921  dehydrogenase  40.32 
 
 
261 aa  132  6e-30  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.932836 
 
 
-
 
NC_004578  PSPTO_1056  oxidoreductase, short chain dehydrogenase/reductase family  34.96 
 
 
254 aa  132  6.999999999999999e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007488  RSP_4004  Short-chain dehydrogenase/reductase SDR  41.39 
 
 
259 aa  131  7.999999999999999e-30  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.132038  n/a   
 
 
-
 
NC_013235  Namu_2351  short-chain dehydrogenase/reductase SDR  36.36 
 
 
268 aa  131  7.999999999999999e-30  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000210403  hitchhiker  0.00391645 
 
 
-
 
NC_013745  Htur_4446  short-chain dehydrogenase/reductase SDR  39.17 
 
 
254 aa  132  7.999999999999999e-30  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.287432  n/a   
 
 
-
 
NC_013730  Slin_5557  short-chain dehydrogenase/reductase SDR  34.46 
 
 
272 aa  131  7.999999999999999e-30  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_012853  Rleg_5681  short-chain dehydrogenase/reductase SDR  34.25 
 
 
257 aa  131  9e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.622704  normal  0.299827 
 
 
-
 
NC_008009  Acid345_0642  short-chain dehydrogenase/reductase SDR  33.73 
 
 
252 aa  131  9e-30  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.220005 
 
 
-
 
NC_007511  Bcep18194_B1514  Short-chain dehydrogenase/reductase SDR  39.76 
 
 
252 aa  130  1.0000000000000001e-29  Burkholderia sp. 383  Bacteria  normal  0.411347  normal  0.744647 
 
 
-
 
NC_013739  Cwoe_3930  short-chain dehydrogenase/reductase SDR  40 
 
 
255 aa  131  1.0000000000000001e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.271838  normal 
 
 
-
 
NC_011992  Dtpsy_1869  short-chain dehydrogenase/reductase SDR  36.73 
 
 
263 aa  131  1.0000000000000001e-29  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_3011  short-chain dehydrogenase/reductase SDR  38.31 
 
 
251 aa  131  1.0000000000000001e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2582  short chain dehydrogenase  38.4 
 
 
269 aa  130  1.0000000000000001e-29  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA2487  short chain dehydrogenase  37.85 
 
 
269 aa  130  2.0000000000000002e-29  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_642  oxidoreductase, short chain dehydrogenase  35.8 
 
 
265 aa  130  2.0000000000000002e-29  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00000000100952  n/a   
 
 
-
 
NC_007434  BURPS1710b_3485  short chain dehydrogenase  37.85 
 
 
269 aa  130  2.0000000000000002e-29  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3298  short chain dehydrogenase  37.85 
 
 
259 aa  130  2.0000000000000002e-29  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4436  short-chain dehydrogenase/reductase SDR  37.21 
 
 
265 aa  130  2.0000000000000002e-29  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0994  short-chain dehydrogenase/reductase SDR  36.11 
 
 
288 aa  130  2.0000000000000002e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4387  short-chain dehydrogenase/reductase SDR  39.11 
 
 
247 aa  130  2.0000000000000002e-29  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A0407  short chain dehydrogenase  37.85 
 
 
259 aa  130  2.0000000000000002e-29  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6823  short-chain dehydrogenase/reductase SDR  35.32 
 
 
258 aa  130  2.0000000000000002e-29  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008836  BMA10229_A1267  short chain dehydrogenase  37.85 
 
 
259 aa  130  2.0000000000000002e-29  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2046  short-chain dehydrogenase/reductase SDR  36.73 
 
 
263 aa  130  2.0000000000000002e-29  Acidovorax sp. JS42  Bacteria  decreased coverage  0.00404736  normal 
 
 
-
 
NC_007604  Synpcc7942_1573  3-oxoacyl-(acyl-carrier protein) reductase  36.4 
 
 
266 aa  129  3e-29  Synechococcus elongatus PCC 7942  Bacteria  normal  0.647658  normal  0.48808 
 
 
-
 
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