| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3420 |
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| Symbol | |
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| ID | 6091274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3752603 |
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| End bp | 3753373 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641598504 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001722140 |
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| Protein GI | 170025635 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0769277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAACG ACTATAAATG GTTTGATACG GCGTTTTCTC TGAGTGGCAA AGTGGCGGCC
ATTACCGGCG GTGCCACGGG GATTGGTCAC GCGATTGCCG AACTGTACTT AGCCAAAGGT
GCACGAGTGG TGTTGATGGA TTGTGCCGAT AATGTCGCTG AAATAGCCGA ACAACTGGAC
AGGGATAATG CCGTCGGATT GCATTGCGAT GTGAGTGATA GCCAATCCGT CAGACAGGCG
GTCGCTCAGG CAATCGGGGC TTTTGGCCAG TTGGATATTT TAGTGAATAG CGCCGGTATT
GCTGCGCTGG ATCCTGCGGA AAAAGTGCGT GAACAAGATT GGGACAGAAC GATTGATATC
AACCTGAAAG GGGTCTTTCT CATGTGCCAG GAAGTGGGAA AACATTTTAT TCAGCATGGG
CATGGCAAAA TCGTCAATTT AGCTTCTCAA GCGGGTGTTG TGGCGCTCCC TAATCACTTG
GCGTATTGCG CCAGTAAATT TGGCGTGATT GGTATCACCA AAGTACTGGC ATTAGAGTGG
GGTCCGTTGG ACATACAGGT TAATGCGATT TCACCGACCG TGGTGCTGAC CGCGTTAGGC
CAGAAAGCGT GGTCAGGCCA ACTCGCTGAA GATATGAAGC TGAAAATACC CGCTCGTCGT
TTTGCTTATC CCGCCGAAGT TGCAGCGTGC GCACTGTTCT TAGCCAGTGA TGCAGCCAAT
ATGATAACCG GTGAAAATTT AGTCATTGAT GGTGGGTATA CCATCCAATA G
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| Protein sequence | MPNDYKWFDT AFSLSGKVAA ITGGATGIGH AIAELYLAKG ARVVLMDCAD NVAEIAEQLD
RDNAVGLHCD VSDSQSVRQA VAQAIGAFGQ LDILVNSAGI AALDPAEKVR EQDWDRTIDI
NLKGVFLMCQ EVGKHFIQHG HGKIVNLASQ AGVVALPNHL AYCASKFGVI GITKVLALEW
GPLDIQVNAI SPTVVLTALG QKAWSGQLAE DMKLKIPARR FAYPAEVAAC ALFLASDAAN
MITGENLVID GGYTIQ
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