Gene Mkms_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0344 
Symbol 
ID4615227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp378880 
End bp379689 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content68% 
IMG OID639790019 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_936351 
Protein GI119866399 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.444272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGAGC GCAACGGACG GGTCGCCGGT AAGCGGGTCG TCGTCACCGG GGCCGCACGA 
GGGATGGGGC GCAGCCACGC CGTCCGGTTG GCCGAAGAGG GCGCCGATCT GATCCTCGTC
GACATCTGCC GGTCACTGCC TGAACTCGAA TACCCGCTTG CCACTGCGGA AGAACTCGAC
GAGACCGGAC GACTGGCCGA GACGCACGGT GCCCGCGTGG TCACCCACGT CGTCGACGTG
CGGGACGGCG CGGCGCTGGC GGCTGCGGTG GACGACGGGG TGGCGCAGCT GGGCGGTCTC
GACGCCGCGG TCGCCAACGC CGGTGTGCTC ACCGTCGGTA CATGGGACAC CACCACCTCC
GAACAGTGGC GCGCGGTGGT CGACGTCAAC CTGATCGGTA CGTGGAACAC CTGCGCCGCG
GCGATTCCAC ACCTCCTCGA GCACGGCGGC AGCCTCGTCA ACATCAGCTC GGCCGCAGGC
GTGAAGGGCA CGCCGCTGCA CACGCCGTAC ACGGCCTCGA AACACGGTGT CGTCGGCATG
ACGCGCGCGC TGGCCAATGA GCTTGCCGCC AAGAGCATCC GGGTCAACAC CGTGCATCCG
ACCGGCGTCG AGACCGGGAT GCGACCGGAT TCATTGCGCG GCGTGCTGGA ATCCCGGCCG
GATCTGGTCC CGCTGTTCCT CAACGCGCTG CCGGTCGTCA TGGCCGACGC GGTCGACATC
AGCAATGCGG TGCTGTTCCT CATATCCGAC GAGTCCCGGT ACGTCACGGG TCTGGAGTTC
AAGGTGGACG CCGGTGTCAC ACTCCGCTGA
 
Protein sequence
MNERNGRVAG KRVVVTGAAR GMGRSHAVRL AEEGADLILV DICRSLPELE YPLATAEELD 
ETGRLAETHG ARVVTHVVDV RDGAALAAAV DDGVAQLGGL DAAVANAGVL TVGTWDTTTS
EQWRAVVDVN LIGTWNTCAA AIPHLLEHGG SLVNISSAAG VKGTPLHTPY TASKHGVVGM
TRALANELAA KSIRVNTVHP TGVETGMRPD SLRGVLESRP DLVPLFLNAL PVVMADAVDI
SNAVLFLISD ESRYVTGLEF KVDAGVTLR