Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0994 |
Symbol | |
ID | 8357108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1195107 |
End bp | 1195973 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644963148 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003120693 |
Protein GI | 256420040 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAAGT CAGAAGATAA AAAGCAAATA AGACCGGAGC AGGAACAACC GCGCCAGCCA GGCATAGAAT CGGAAATGGA ACCCAAACCG GTATTTGAGA AAAAGGAAGG TCCTGTAGGT AAACTAATGG ACAGAGTAGC CCTTATTACC GGTGGTGATA GCGGTATCGG AAGGGCAGTA GCGGTAGCTT TTGCCAGAGA AGGGGCAAAT GTTGTTATTG CCTACCTGGA TGAACACGAC GATGCCGCAT TGACACAGAG GCATGTAGAA GAATATGGAC GTAAAGCATT ACTGGTGCCG GGGGATTTAT CTGATGAAAA ACACTGTGCA GCTGTTGTGG CGAAAGCAGT AGATACTTTC GGCAGACTGG ACATTGTCGT GAATAATGCA GCGGTACAAT ATCCACAGAA AAATCTGGAA GATATTACTG CGGAGCAGTT ACAGAAGACT TTCGCCACCA ATATCTTTTC ACAATTCTAT ATTTCAAAGG CAGCCCTGCC ACACTTGAAG GAGGGCGCTG CTATCATCAA CACGACTTCT GTTACTGCAT ACAGAGGCAG TGGGCATCTC ATCGATTATT CCAGCACGAA AGGAGCTATT GTCAGCTTTA CCCGCTCTCT TTCATCTACG CTGGCAGAAA GAAAGATCAG GGTAAATGCG GTAGCGCCCG GACCTATCTG GACACCATTG ATACCTGCCA CCTTTGATGC GGAACATGTA AAAACCTTCG GTTCGGACGT GCCTTTGAAA CGCGCGGGAG AACCTGTGGA AGTAGCTGCC AGTTATGTAT TCCTGGCCAG TGATGACGCC AGTTATATGA CAGGACAGGT GCTGCATCCC AACGGGGGAG AAATCGTGAA TGGCTAG
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Protein sequence | MQKSEDKKQI RPEQEQPRQP GIESEMEPKP VFEKKEGPVG KLMDRVALIT GGDSGIGRAV AVAFAREGAN VVIAYLDEHD DAALTQRHVE EYGRKALLVP GDLSDEKHCA AVVAKAVDTF GRLDIVVNNA AVQYPQKNLE DITAEQLQKT FATNIFSQFY ISKAALPHLK EGAAIINTTS VTAYRGSGHL IDYSSTKGAI VSFTRSLSST LAERKIRVNA VAPGPIWTPL IPATFDAEHV KTFGSDVPLK RAGEPVEVAA SYVFLASDDA SYMTGQVLHP NGGEIVNG
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