| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0261 |
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| Symbol | |
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| ID | 8223827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 294512 |
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| End bp | 295369 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644928140 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003084697 |
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| Protein GI | 255034076 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.566144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTAG ATATTGATAC CAAAGGGCAA ACGCAAAGCA CGCAGCCCGG CATAGAAGAA
GTGATGGACC CGGCACCGGT GGTGATACGG GACAACTACC GCGGCAGCGG CAAGTTGCAG
GGAAAAACGG CACTCATTAC CGGCGGCGAC AGCGGCATTG GCCGGTCCGT GGCCGTCCAT
TTCGCAAGGG AAGGCGCCGA TGTGGCGATT GTGTACCTCA ATGAAGGCCA GGACGCCAAC
GATACGAAGG CCATGGTGGA AGCCGAAGGT AAAAACTGCC TGCTTATCCA GGGCGACATC
CGTGACGAGG CTTTCTGCAA GGAAGCCGTG CGCCAGACGG TGAGCGAGTT TGGGAAACTG
AATATCCTCG TGAACAATGC AGCCGAGCAG CATCCGAAGG AGAACGTCGA CGAGATTTCG
CCCGACCAGC TGAGCGACAC TTTCGCAACC AACATTTTCT CCTTCTTTTA TTTCACCCAG
GCAGCGATGC CGCATTTGGC AGAGGGAGAC AACATTATTA ACACCACATC CATCACCGCC
TACCGGGGCA GCCCGTCCCT GCTCGACTAT TCGTCAACCA AAGGGGCGAT CGTTGCCTAC
ACGCGGTCGC TGGCTGGTAA CCTGGCCGAA AAGGGCATCA GGGTTAATGC GGTAGCACCG
GGGCCGATCT GGACGCCGCT CATCCCGTCG ACATTCGACT CTGAGCGGGT GAAAGAGTTC
GGAAAGGACA CGCCGTTTAA GCGGCCGGGG CAGCCCTGCG AAGTGGCGAC CTGCTATGTG
TTCCTGGCCA GCGAAGACGC TTCCTACATG AGCGGACAAG TGCTGCATCC GAATGGCGGA
CAGGTGATTA ACGGATGA
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| Protein sequence | MSLDIDTKGQ TQSTQPGIEE VMDPAPVVIR DNYRGSGKLQ GKTALITGGD SGIGRSVAVH
FAREGADVAI VYLNEGQDAN DTKAMVEAEG KNCLLIQGDI RDEAFCKEAV RQTVSEFGKL
NILVNNAAEQ HPKENVDEIS PDQLSDTFAT NIFSFFYFTQ AAMPHLAEGD NIINTTSITA
YRGSPSLLDY SSTKGAIVAY TRSLAGNLAE KGIRVNAVAP GPIWTPLIPS TFDSERVKEF
GKDTPFKRPG QPCEVATCYV FLASEDASYM SGQVLHPNGG QVING
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