| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3395 |
|---|
| Symbol | |
|---|
| ID | 4112227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 3597151 |
|---|
| End bp | 3597918 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638032528 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_640558 |
|---|
| Protein GI | 108800361 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.746696 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGTCGGC GTGAGACAGT CGTCGCCATG ACACAGCTGA GCGGCAAGGT GGCGTTGGTG
ACGGGCGCGT CGTCGGGGTT GGGTGCGGCG ACGGCGAAAG TGTTCGCCGA GCGCGGTGCG
ACGGTGTTCG GGATCTCCCG CGACGCCGAC CGGATGGCGT CGGTGTTCGC CGACGTGCCC
GGCGGGACGT ACGCGTCGGT CGACATCACC TCCCCCGAGG CCTGCCGCCG AGCCGTCGAC
GACTGCGTCG CGAAGTTCGG CAGGCTCGAC GTGCTGGCGA ACATCGCCGG CTACCACCAG
ATGCGGCATA CCCCGACGAT GTCCGATGCC GACTGGGACC ACGACCTCGC CGTCAACCTC
AACGGCCCGT TCTTCCTGTG CCGCGCCGCG TTACCGCACC TGCTCGAGAC CGGCGGCAGC
ATCGTCAACG TCGCCTCCAT CGCGGGTGTC GAGGGTGAGG TGTACTCGGC GGGCTACTGT
GCGGCCAAAC ACGGTCTGGT CGGTCTGACG CGCGCACTGG CCATCGAGTT CACCGCGGAC
CGGGTGCGGA TCAACGCCGT CTGCCCCGGC GGCATGGTCA CCCCGCAGAC GACGGAGTTC
TCCGCACCCG ATCAGGCGGA CTGGAACCTG ATCATGCGCA TCGCCGCACC CCGCGGGATG
ATGGATGTCG CCGACGTCGC CAAGACCATC GCGTTTCTGG CCAGCGATGA CGCCGCGGCG
GTGCACGGCG CGGTGTACGT GGTGGACAAC GGGAAGACGG CAGGATGA
|
|---|
| Protein sequence | MRRRETVVAM TQLSGKVALV TGASSGLGAA TAKVFAERGA TVFGISRDAD RMASVFADVP
GGTYASVDIT SPEACRRAVD DCVAKFGRLD VLANIAGYHQ MRHTPTMSDA DWDHDLAVNL
NGPFFLCRAA LPHLLETGGS IVNVASIAGV EGEVYSAGYC AAKHGLVGLT RALAIEFTAD
RVRINAVCPG GMVTPQTTEF SAPDQADWNL IMRIAAPRGM MDVADVAKTI AFLASDDAAA
VHGAVYVVDN GKTAG
|
|---|
| |