| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6958 |
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| Symbol | |
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| ID | 5675271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8481563 |
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| End bp | 8482366 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641245807 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001511198 |
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| Protein GI | 158318690 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.605436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGGT TATTCGAAGG CAAGACCGCT CTCATCACCG GCGCCGGCTC CGGAATGGGC
CGAGCCATCA CCCTGCGACT CGTCGGGCAG GGCGCCTCGG TGCTCGCCCT GGACATCGAC
GCCGACCGGC TCGTCGAGAC GAAAGCCCTC GCGGCAAAGG CCCTCGAGAC GGAGGCCCTC
GCGACGGAGG CCCTCGAGAC GGCCCGAGTG GCGGGCACGG TGTCCGTCCG CCAGGCCGAC
GTCAGCGACC CCGGCGCATG CGCCGAGGCG GTGGCCGCCT GCGTGGCGGA GTTCGGGAAA
CTGGACGTGC TGGGCAACGT CGCCGGCATC TACCTCGCCG AGCACACCAC CAAGGTCACC
GTCGAGCAGT ACCGCCGCGT GATGGGCGTC AACCTCGACG CCTGTTTCTT CCTGGCTCAG
GCCGCCATCC CGCACCTGCT GGAGACGGGT GGCAACATTG TCAACATCGC GTCCAACGCC
GGGCTCCAGG GCGTGCCTTA CTCCGCGGCC TATTCCATGA GCAAGGGCGG CGTGGTCGCG
CTGACCCGGT CGCTGGCCGT CGAGTTCCTG AAGACGCCGC TGCGGGTCAA CGCCATCGCC
CCGGCGGGCA CCAACACCAA CATCGCGACC TCGGGATCGT TCCCGTCCGG CATGGACCCC
GACCTCGCCC GGCGGATGGC GGGCCTGCGC GGCCTGGCCG AGCCGGAGGA GATCGCCGCC
CTGTTCTCGT TCCTCGCCTC CGCCGACGCC CGCTCGGTGA CCGGCGCCGT CTACACCGTC
GACAACGGCC TCACCATCAG CTGA
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| Protein sequence | MTGLFEGKTA LITGAGSGMG RAITLRLVGQ GASVLALDID ADRLVETKAL AAKALETEAL
ATEALETARV AGTVSVRQAD VSDPGACAEA VAACVAEFGK LDVLGNVAGI YLAEHTTKVT
VEQYRRVMGV NLDACFFLAQ AAIPHLLETG GNIVNIASNA GLQGVPYSAA YSMSKGGVVA
LTRSLAVEFL KTPLRVNAIA PAGTNTNIAT SGSFPSGMDP DLARRMAGLR GLAEPEEIAA
LFSFLASADA RSVTGAVYTV DNGLTIS
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