Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_72840 |
Symbol | |
ID | 4382382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 6486815 |
End bp | 6487573 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639328470 |
Product | putative short-chain dehydrogenase |
Protein accession | YP_793999 |
Protein GI | 116053672 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.118155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGC CCGTCGTTCT TATCACTGGT GCAGCCGGCG GCTTGGGCCG GGCAATCGCC AAGCGTTTCG CCCAGAGTCA TTGGCGCATC GCCGCCACGG ATGTGGATAA GGAGGGCCTG CACGCGCTGA ACGCGCAGGT GCCGTTGGAC GCCAGCGGGG TCGCCGACCT GCGCAGCGCG GATAACTGCC ATACCCTGAT GTCGAAGATT CTCGCCCGTA CCGGACGTCT CGACGCCCTG GTGAATGCCG CGGGCGTCTG GCGCGAGGGG CCTGTGGAAA ACTTCACCGA GGAGGATTTC GACCTGGTCC TGGGAGTCAA CCTCAAGGCC TCCTTCTACA TGTGTCAGGC CGCGATACCC TACCTGAAGG AAAACCAGGG CAGCATCGTC AACATCTCCA GCGACTCCGG ACGCCAGGCC TACCGGGGTT CGGCGGCGTA TTGCGCGAGC AAGGCGGCGC TGACCATGCT GAGCAAGACC CTCGCGCTGG AACTGGCCGA GCAGGGCGTG CGGGTCAACG CCGTGTCGCC GGCGGATATC GCCACGCCGA TGCTCGACTA CCAGGCCGAA CGCTATGGGA TGGGCAATCC GGATGGCTAC AAGCGCGCGC TGCTGAAGGA TTATCCACAG GGCAAGGCGG CACGCTTCAT CCGCCCGGAA GAAGTCGCCG AGCTGGTCTG GTATCTCTGC GGCCCTCAGG CCGAAGCGAT CACGGGCGCC GACTTGGCGG TGGACTTCGG CCTGTCCGCT GGCCGCTGA
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Protein sequence | MSTPVVLITG AAGGLGRAIA KRFAQSHWRI AATDVDKEGL HALNAQVPLD ASGVADLRSA DNCHTLMSKI LARTGRLDAL VNAAGVWREG PVENFTEEDF DLVLGVNLKA SFYMCQAAIP YLKENQGSIV NISSDSGRQA YRGSAAYCAS KAALTMLSKT LALELAEQGV RVNAVSPADI ATPMLDYQAE RYGMGNPDGY KRALLKDYPQ GKAARFIRPE EVAELVWYLC GPQAEAITGA DLAVDFGLSA GR
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