| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6243 |
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| Symbol | |
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| ID | 5674562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 7579647 |
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| End bp | 7580393 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641245095 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001510491 |
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| Protein GI | 158317983 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGATT TATTCGAGGG CAAGGTCGCC CTCATCACCG GCGCCGGATC AGGCATGGGC
CGGGCGATCA CCATCCGGCT GGCGAGGGAA GGCGCCTCGG TGTTGGCCCT CGACATCGAC
GAGGGCCGGC TGGCCGAGAC GAAGGCACTC ACCGCGGGCA CGGTGTCGGT CCGCCAGGCT
GATGTCAGCG ACCCGGCTGC GTGCGCCGAG GCGGTGGCCG CGTGCGTCGA CGAGTTCGGG
CAGCTGGACG TACTGGGCAA CGTCGCCGGT ATCTACCTGG CCGAGCACAC CACGAAGGTG
ACTCTGGAGC AGTACCGACG GGTGATGGGC GTCAATCTTG ACGCCTACTT CTTCCTGGCT
CAGGCCGCCA TTCCGCACCT GTTGGAGACG GGTGGCAACA TCGTGAACAT CGCCTCCAAC
GCCGGTATCC AGGGGCTCCC GTACTCCGCC GCCTACTGCA TGAGCAAGGG TGGCGTCATC
CAGCTCACCC GGGCGCTGGC CGTCGAGTTC CTCAAGACGC CGCTGCGCGT CAATGCCATC
GCCCCGGCGG GCACCAACAC CAACATCGCG TCGGCGATGA CGTTCCCGGC CGGCATGGAC
CCCGACCTTG CCCGTCGCAT GGCGGGCCTG CGGGGCCTGG CCGAGCCAGC CGAGGTCGCC
GCGCTGTTCT CCTTCCTCGC CTCCGGTGCG GCCCGTTCGG TGACCGGCTC CGTCTACACC
ATGGACAACG GCCTCACCGT CAGCTGA
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| Protein sequence | MTDLFEGKVA LITGAGSGMG RAITIRLARE GASVLALDID EGRLAETKAL TAGTVSVRQA
DVSDPAACAE AVAACVDEFG QLDVLGNVAG IYLAEHTTKV TLEQYRRVMG VNLDAYFFLA
QAAIPHLLET GGNIVNIASN AGIQGLPYSA AYCMSKGGVI QLTRALAVEF LKTPLRVNAI
APAGTNTNIA SAMTFPAGMD PDLARRMAGL RGLAEPAEVA ALFSFLASGA ARSVTGSVYT
MDNGLTVS
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