Gene Pfl01_2468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2468 
Symbol 
ID3715286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2821523 
End bp2822287 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content63% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_348199 
Protein GI77458693 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACT TCAAGAACAG CACCCCAAAC GAAGTGGCCG GTAAAGTCGC ACTGGTCACT 
GGCGCGGCCA GTGGCATCGG CAAGGCCATC GCACTGCTGC TGCATGCCCG CGGCGCCCAG
GTCATTGCTG AAGATATAAA CCCTGAGGTG GAAGCACTGG CCCGCCCCGG CCTGGTCCCC
CTGGTGGCCG ACATCACTCA GGACGGGGCA GCCGAACGCG CGGTCGCCCT GGCCGTCGAG
CAATTCGGAC GGCTGGACAT TCTGGTCAAC AACGCCGGCA TCATCATCAA CAAACTGGTC
ATCGACATGA CCCGCGAAGA CTGGGAACGC ATTCAGGCGG TCAACGCCAC GGCGGCCTTT
TTGCATAGCC GGGAGGCGGT CAAAGCGATG ATGCCCAACA AGTCCGGATC GATCGTCAAC
ATCGCGTCCT ACGCCTCCTA TTTCGCCTTC CCCACCATTG CCGCCTACAC CGCCTCCAAG
GGCGCGCTGG CCCAACTGAC GCGCACCCTG GCGCTTGAAG TCATTGGCCA CGGCATCCGG
GTCAATGCTG TCGGTGTCGG CGATGTGGTG ACCAACATCC TTAACAATGT GGTCGACGAC
GGCCCTGCCT TTCTCGCCCA ACATGGGGAA GCGGCACCGA TCGGCCGCGC CGCCCAACCG
GAAGAAATCG CCGAAGTGGT CGCGTTCATC GCCTCGGATC GGGCCAGTTT CATGGTCGGT
TCGGTGGTCA TGGCCGACGG CGGCATGACG GTCACGGCCG GCTGA
 
Protein sequence
MTDFKNSTPN EVAGKVALVT GAASGIGKAI ALLLHARGAQ VIAEDINPEV EALARPGLVP 
LVADITQDGA AERAVALAVE QFGRLDILVN NAGIIINKLV IDMTREDWER IQAVNATAAF
LHSREAVKAM MPNKSGSIVN IASYASYFAF PTIAAYTASK GALAQLTRTL ALEVIGHGIR
VNAVGVGDVV TNILNNVVDD GPAFLAQHGE AAPIGRAAQP EEIAEVVAFI ASDRASFMVG
SVVMADGGMT VTAG