Gene Nther_2742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2742 
Symbol 
ID6316905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2960427 
End bp2961167 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content40% 
IMG OID642645116 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001918881 
Protein GI188587336 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATTAC AAGATAAAGT GGCATTGATT ACAGGAGGGG CAGCTGGAAT TGGTAAAGTT 
ACAGCTCAAA AGTTTGTAGA TGAAGGGGCT AAGGTAATCA TTTGCGATGT AGAGGAAGAG
ACACTGTCTG AGACAAGGAA TGCCCTGAGT GCAAGTGGAG GAAGTATTGA AGCCAAAGTA
ACTGATGTGA CCAATAAAAC CCAGGTAGAT CAACTCATTG ATCAAATCGT AAATGATTAC
GGCAAGTTGG ACGTAGTTGT CAATAATGCT GGAGTGACTG CTGATGCCAC TTTAACTAAA
ATGGCAGAAG AACAGTTTGA TAAAGTAATT AATGTCAATT TAAAAGGTGT ATTCCTAGTA
GGCCAAAAAG CAGCCAAAAT CATGAAAAAG CAGGAACAGG GAGTTATTCT AAATGCTTCT
TCCGTAGTAG GTCTATATGG AAATTTTGGC CAGACCAACT ATGCAGCAAC TAAATGGGGA
GTCATAGGCA TGACCAAAAC TTGGGCTAAA GAACTGGGTA AAAATAATGT ACGAGTAAAT
GCAGTGGCCC CCGGGTTCAT TGAAACTGAA ATGGTTTCTG AAATGCCCGA GAAAGTGGTT
AATATGATGC AGGAAAAATC ACCTCTTAAT AGATTGGGAA GTCCTGAAGA AGTTGCTAAT
ATTTATTGTT TTCTGGCTTC TGATGACAGC TCTTTTGTAA CAGGTTCAGT TTATGGTGTA
GACGGTGGAG TGGTACTGTA G
 
Protein sequence
MKLQDKVALI TGGAAGIGKV TAQKFVDEGA KVIICDVEEE TLSETRNALS ASGGSIEAKV 
TDVTNKTQVD QLIDQIVNDY GKLDVVVNNA GVTADATLTK MAEEQFDKVI NVNLKGVFLV
GQKAAKIMKK QEQGVILNAS SVVGLYGNFG QTNYAATKWG VIGMTKTWAK ELGKNNVRVN
AVAPGFIETE MVSEMPEKVV NMMQEKSPLN RLGSPEEVAN IYCFLASDDS SFVTGSVYGV
DGGVVL