More than 300 homologs were found in PanDaTox collection
for query gene Bxe_C0796 on replicon NC_007953
Organism: Burkholderia xenovorans LB400



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007953  Bxe_C0796  putative dehydrogenase  100 
 
 
105 aa  206  9e-53  Burkholderia xenovorans LB400  Bacteria  normal  0.92444  normal 
 
 
-
 
NC_007509  Bcep18194_C7138  short chain dehydrogenase  65.71 
 
 
260 aa  132  1.9999999999999998e-30  Burkholderia sp. 383  Bacteria  normal  0.998532  normal 
 
 
-
 
NC_009485  BBta_2878  short chain dehydrogenase  42.86 
 
 
258 aa  78.6  0.00000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.240803  normal  0.0339025 
 
 
-
 
NC_007951  Bxe_A3257  putative 3-oxoacyl-acyl carrier protein reductase  38.1 
 
 
259 aa  78.6  0.00000000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.0566153  normal  0.418945 
 
 
-
 
NC_010681  Bphyt_1303  short-chain dehydrogenase/reductase SDR  37.14 
 
 
259 aa  78.2  0.00000000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  0.154867  normal  0.0871554 
 
 
-
 
NC_008390  Bamb_2330  short-chain dehydrogenase/reductase SDR  36.19 
 
 
259 aa  75.1  0.0000000000003  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2208  short-chain dehydrogenase/reductase SDR  36.19 
 
 
259 aa  75.1  0.0000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.336154  normal  0.942948 
 
 
-
 
NC_010622  Bphy_2062  short-chain dehydrogenase/reductase SDR  40 
 
 
259 aa  74.7  0.0000000000004  Burkholderia phymatum STM815  Bacteria  normal  0.861645  normal  0.226141 
 
 
-
 
NC_008044  TM1040_1803  short-chain dehydrogenase/reductase SDR  37.14 
 
 
259 aa  73.9  0.0000000000007  Ruegeria sp. TM1040  Bacteria  normal  0.560822  normal  0.0105475 
 
 
-
 
NC_013411  GYMC61_1799  short-chain dehydrogenase/reductase SDR  37.96 
 
 
261 aa  73.2  0.000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007651  BTH_I1017  short chain dehydrogenase/reductase family oxidoreductase  34.29 
 
 
325 aa  72.8  0.000000000002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1722  short-chain dehydrogenase/reductase SDR  35.24 
 
 
259 aa  70.9  0.000000000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.736401  normal  0.528714 
 
 
-
 
NC_010084  Bmul_0986  short-chain dehydrogenase/reductase SDR  34.29 
 
 
278 aa  70.9  0.000000000006  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1983  short-chain dehydrogenase/reductase SDR  36.7 
 
 
263 aa  70.5  0.000000000006  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1680  short-chain dehydrogenase/reductase SDR  34.29 
 
 
285 aa  69.7  0.00000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0641216  n/a   
 
 
-
 
NC_008148  Rxyl_1866  short-chain dehydrogenase/reductase SDR  36.7 
 
 
265 aa  69.3  0.00000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0923  short-chain dehydrogenase/reductase SDR  35.45 
 
 
261 aa  69.7  0.00000000001  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05256  short-chain dehydrogenase/reductase SDR  49.43 
 
 
259 aa  68.9  0.00000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007510  Bcep18194_A5619  Short-chain dehydrogenase/reductase SDR  34.29 
 
 
277 aa  69.3  0.00000000002  Burkholderia sp. 383  Bacteria  normal  0.0753007  normal 
 
 
-
 
NC_010682  Rpic_2383  short-chain dehydrogenase/reductase SDR  36.7 
 
 
263 aa  69.3  0.00000000002  Ralstonia pickettii 12J  Bacteria  normal  0.378112  normal 
 
 
-
 
NC_010508  Bcenmc03_2315  short-chain dehydrogenase/reductase SDR  34.29 
 
 
259 aa  69.3  0.00000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.400056 
 
 
-
 
NC_008542  Bcen2424_2292  short-chain dehydrogenase/reductase SDR  34.29 
 
 
259 aa  69.3  0.00000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_1925  short-chain dehydrogenase/reductase SDR  39.6 
 
 
288 aa  68.6  0.00000000003  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  44.32 
 
 
275 aa  68.6  0.00000000003  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  43.96 
 
 
264 aa  68.2  0.00000000004  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_1969  short chain dehydrogenase/reductase family oxidoreductase  48.28 
 
 
260 aa  68.2  0.00000000004  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3195  short-chain dehydrogenase/reductase SDR  38.53 
 
 
264 aa  68.2  0.00000000004  Rhodoferax ferrireducens T118  Bacteria  normal  0.857266  n/a   
 
 
-
 
NC_008048  Sala_0883  short-chain dehydrogenase/reductase SDR  39.25 
 
 
264 aa  68.2  0.00000000004  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3131  short-chain dehydrogenase/reductase SDR  42.99 
 
 
245 aa  68.2  0.00000000004  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3415  short chain dehydrogenase  41.75 
 
 
268 aa  67.8  0.00000000005  Shewanella loihica PV-4  Bacteria  normal  0.560569  normal 
 
 
-
 
NC_008639  Cpha266_0226  short-chain dehydrogenase/reductase SDR  49.41 
 
 
259 aa  67.8  0.00000000005  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.996462  n/a   
 
 
-
 
NC_011071  Smal_3830  short-chain dehydrogenase/reductase SDR  35.85 
 
 
259 aa  67  0.00000000008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2814  short-chain dehydrogenase/reductase SDR  44.44 
 
 
260 aa  67  0.00000000009  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.563613  normal 
 
 
-
 
NC_006348  BMA1882  short chain dehydrogenase/reductase family oxidoreductase  35.24 
 
 
259 aa  66.6  0.0000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0800306  n/a   
 
 
-
 
NC_009076  BURPS1106A_1243  short chain dehydrogenase/reductase family oxidoreductase  35.24 
 
 
259 aa  66.6  0.0000000001  Burkholderia pseudomallei 1106a  Bacteria  decreased coverage  0.00809972  n/a   
 
 
-
 
NC_007434  BURPS1710b_1388  short chain dehydrogenase/reductase family oxidoreductase  35.24 
 
 
259 aa  66.6  0.0000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1207  short-chain dehydrogenase/reductase SDR  34.29 
 
 
259 aa  66.2  0.0000000001  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_0361  short chain dehydrogenase/reductase family oxidoreductase  35.24 
 
 
259 aa  66.6  0.0000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0730868  n/a   
 
 
-
 
NC_009074  BURPS668_1234  short chain dehydrogenase/reductase family oxidoreductase  35.24 
 
 
259 aa  66.6  0.0000000001  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1078  short chain dehydrogenase/reductase family oxidoreductase  35.24 
 
 
259 aa  66.6  0.0000000001  Burkholderia mallei SAVP1  Bacteria  normal  0.296983  n/a   
 
 
-
 
NC_008836  BMA10229_A0789  short chain dehydrogenase/reductase family oxidoreductase  35.24 
 
 
259 aa  66.6  0.0000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0355352  n/a   
 
 
-
 
NC_009441  Fjoh_3794  short-chain dehydrogenase/reductase SDR  41.67 
 
 
262 aa  65.5  0.0000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1545  short-chain dehydrogenase/reductase SDR  32.73 
 
 
261 aa  65.5  0.0000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00435006  n/a   
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  37.04 
 
 
258 aa  66.2  0.0000000002  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2036  short-chain dehydrogenase/reductase SDR  38.53 
 
 
258 aa  65.5  0.0000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  44.32 
 
 
275 aa  65.1  0.0000000003  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_012917  PC1_2681  short-chain dehydrogenase/reductase SDR  44.71 
 
 
261 aa  65.1  0.0000000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_2349  short-chain dehydrogenase/reductase SDR  35.85 
 
 
260 aa  65.5  0.0000000003  Paracoccus denitrificans PD1222  Bacteria  normal  0.482868  normal 
 
 
-
 
CP001800  Ssol_1953  short-chain dehydrogenase/reductase SDR  33.33 
 
 
265 aa  64.7  0.0000000004  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_009719  Plav_0130  short-chain dehydrogenase/reductase SDR  33.33 
 
 
259 aa  64.7  0.0000000004  Parvibaculum lavamentivorans DS-1  Bacteria  hitchhiker  0.0000437524  normal 
 
 
-
 
NC_008781  Pnap_3235  short-chain dehydrogenase/reductase SDR  37.27 
 
 
264 aa  64.7  0.0000000004  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  41.41 
 
 
260 aa  64.3  0.0000000005  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  41.57 
 
 
259 aa  64.3  0.0000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0154  short-chain dehydrogenase/reductase SDR  41.3 
 
 
261 aa  63.9  0.0000000006  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008701  Pisl_1089  short-chain dehydrogenase/reductase SDR  36.11 
 
 
260 aa  64.3  0.0000000006  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  43.02 
 
 
257 aa  64.3  0.0000000006  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  43.9 
 
 
256 aa  63.9  0.0000000007  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_009620  Smed_3758  short-chain dehydrogenase/reductase SDR  43.33 
 
 
299 aa  63.9  0.0000000007  Sinorhizobium medicae WSM419  Bacteria  normal  0.297651  normal 
 
 
-
 
NC_009952  Dshi_1339  short-chain dehydrogenase/reductase SDR  33.33 
 
 
259 aa  63.9  0.0000000007  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.0406347 
 
 
-
 
NC_013162  Coch_1303  short-chain dehydrogenase/reductase SDR  35.16 
 
 
258 aa  63.9  0.0000000007  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3177  short-chain dehydrogenase/reductase SDR  31.13 
 
 
258 aa  63.5  0.0000000008  Pseudomonas putida F1  Bacteria  normal  normal  0.567568 
 
 
-
 
NC_010524  Lcho_1226  short-chain dehydrogenase/reductase SDR  34.58 
 
 
263 aa  63.5  0.0000000009  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010338  Caul_1924  short-chain dehydrogenase/reductase SDR  37.14 
 
 
237 aa  63.2  0.000000001  Caulobacter sp. K31  Bacteria  normal  0.62919  normal 
 
 
-
 
NC_009511  Swit_1007  short-chain dehydrogenase/reductase SDR  43.12 
 
 
245 aa  63.2  0.000000001  Sphingomonas wittichii RW1  Bacteria  normal  0.553727  normal  0.0273902 
 
 
-
 
NC_007347  Reut_A2505  Short-chain dehydrogenase/reductase SDR  36.11 
 
 
262 aa  62.8  0.000000001  Ralstonia eutropha JMP134  Bacteria  normal  0.80685  n/a   
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  41.84 
 
 
261 aa  63.2  0.000000001  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_009512  Pput_3738  short-chain dehydrogenase/reductase SDR  42.55 
 
 
245 aa  63.5  0.000000001  Pseudomonas putida F1  Bacteria  normal  0.880926  normal 
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  38.54 
 
 
257 aa  63.2  0.000000001  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_011004  Rpal_1937  short chain dehydrogenase  43.14 
 
 
259 aa  63.2  0.000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.157312  n/a   
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  46.67 
 
 
262 aa  63.2  0.000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  43.01 
 
 
259 aa  63.2  0.000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_002947  PP_2540  short chain dehydrogenase/reductase family oxidoreductase  31.13 
 
 
258 aa  62.8  0.000000002  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00698134 
 
 
-
 
NC_013421  Pecwa_1556  short-chain dehydrogenase/reductase SDR  42.35 
 
 
261 aa  62.4  0.000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.596662  n/a   
 
 
-
 
NC_012560  Avin_16730  glucose/ribitol dehydrogenase family protein  33.02 
 
 
262 aa  62  0.000000002  Azotobacter vinelandii DJ  Bacteria  normal  0.681173  n/a   
 
 
-
 
NC_009997  Sbal195_4040  short chain dehydrogenase  39.42 
 
 
267 aa  62.4  0.000000002  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3844  short chain dehydrogenase  39.42 
 
 
267 aa  62.4  0.000000002  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000447473 
 
 
-
 
NC_009665  Shew185_3918  short chain dehydrogenase  39.42 
 
 
267 aa  62.4  0.000000002  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  44.9 
 
 
262 aa  62.4  0.000000002  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  45.88 
 
 
249 aa  62.4  0.000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  43 
 
 
262 aa  62.8  0.000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_009052  Sbal_0416  short chain dehydrogenase  39.42 
 
 
267 aa  62.4  0.000000002  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0610  putative short-chain dehydrogenase/reductase  40.59 
 
 
286 aa  61.6  0.000000003  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0678259 
 
 
-
 
NC_007953  Bxe_C0635  putative short-chain dehydrogenase/reductase  41.18 
 
 
246 aa  61.6  0.000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.660542  normal  0.0297002 
 
 
-
 
NC_010501  PputW619_2737  short-chain dehydrogenase/reductase SDR  38.68 
 
 
245 aa  61.6  0.000000004  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  39.53 
 
 
258 aa  61.6  0.000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_008312  Tery_0205  short-chain dehydrogenase/reductase SDR  38.04 
 
 
257 aa  61.6  0.000000004  Trichodesmium erythraeum IMS101  Bacteria  normal  0.76225  normal  0.242071 
 
 
-
 
NC_008700  Sama_0389  short chain dehydrogenase  39.62 
 
 
270 aa  61.2  0.000000004  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  40.22 
 
 
264 aa  61.2  0.000000005  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  43.48 
 
 
260 aa  60.8  0.000000005  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_009719  Plav_1678  short-chain dehydrogenase/reductase SDR  39.25 
 
 
255 aa  60.8  0.000000005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.157032 
 
 
-
 
NC_008254  Meso_1537  short-chain dehydrogenase/reductase SDR  32.26 
 
 
259 aa  61.2  0.000000005  Chelativorans sp. BNC1  Bacteria  normal  0.460679  n/a   
 
 
-
 
NC_014150  Bmur_1122  short-chain dehydrogenase/reductase SDR  34.38 
 
 
258 aa  61.2  0.000000005  Brachyspira murdochii DSM 12563  Bacteria  normal  0.0189644  n/a   
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  43.68 
 
 
264 aa  60.8  0.000000006  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_008321  Shewmr4_0441  short chain dehydrogenase  40.95 
 
 
267 aa  60.8  0.000000006  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2744  short-chain dehydrogenase/reductase SDR  33.88 
 
 
276 aa  60.8  0.000000006  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4739  short-chain dehydrogenase/reductase SDR  38.68 
 
 
256 aa  60.8  0.000000006  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  35.51 
 
 
263 aa  60.8  0.000000006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010322  PputGB1_2024  short-chain dehydrogenase/reductase SDR  31.13 
 
 
258 aa  60.5  0.000000007  Pseudomonas putida GB-1  Bacteria  normal  0.298877  normal 
 
 
-
 
NC_009440  Msed_1761  short-chain dehydrogenase/reductase SDR  35.48 
 
 
265 aa  60.5  0.000000007  Metallosphaera sedula DSM 5348  Archaea  normal  normal  0.254427 
 
 
-
 
NC_007492  Pfl01_2470  Short-chain dehydrogenase/reductase SDR  37.74 
 
 
244 aa  60.5  0.000000008  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>