| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2024 |
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| Symbol | |
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| ID | 5869813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2271911 |
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| End bp | 2272687 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641547149 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001668261 |
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| Protein GI | 167033030 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.298877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTAG GTATTACCGG CCGCTGGGCC ATCGTCTGCG CGGCCAGCCA GGGCCTGGGC
AAAGGCTGCG CCGAGGCGCT TGGCAAAGAG GGCGTCAACC TGGTCATCAA TGCCCGTACC
GACGCCACCT TGCAGCAGAC CGCCAATGAG TTGCGCGCGG CTAATCCGGG CATCGAGGTG
CGTACCGTAG CCGGTGATGT AGCCGATGCC GAGGTACGTC AGGCGCTGCT GGCGGCCTGC
CCGCAGGTCG ATATTCTGGT CAACAACGCC GGTGGCCCGC CACCGGGGGA CTTCCGTGAC
TGGGGGCGTG AAGACTGGCT GAAGGCGTTG GACGCCAACA TGCTCACCCC CATCGAGCTG
ATCAAAGCGG TGGTCGATGG CATGGCCGAG CGGGGGTTCG GCCGGGTGGT GAATATCACT
TCAGGCGCGG TGAAGGCACC GATCGACATA CTGGGCCTGT CCAATGGCGC CCGCAGTGGC
CTGACCGGCT TCATCGCCGG ACTGGCCCGG CAGCAGCGCC TGGCGGGCAG CAACGTGACG
CTGAACAACC TGCTGCCTGG GGCATTCGAC ACGGCGCGTC TGCAAAAGAC GTTGAAGGCG
GCAGGCGGTG ATGTGCAAGC CACTGCCCAG GCGCGGCGCA AGGCCATTCC GGCGGCACGC
TTTGGTGATG CCGGGGAGTT CGGCGCTTAT TGCGCGTTTC TGTGCAGCGC GCAGGCCGGG
TACATCACCG GGCAGAACCT GCTGATTGAT GGCGGGGCGT ATCCGGGTAC GTTCTGA
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| Protein sequence | MDLGITGRWA IVCAASQGLG KGCAEALGKE GVNLVINART DATLQQTANE LRAANPGIEV
RTVAGDVADA EVRQALLAAC PQVDILVNNA GGPPPGDFRD WGREDWLKAL DANMLTPIEL
IKAVVDGMAE RGFGRVVNIT SGAVKAPIDI LGLSNGARSG LTGFIAGLAR QQRLAGSNVT
LNNLLPGAFD TARLQKTLKA AGGDVQATAQ ARRKAIPAAR FGDAGEFGAY CAFLCSAQAG
YITGQNLLID GGAYPGTF
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