Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1007 |
Symbol | |
ID | 5198311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 1122273 |
End bp | 1123010 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640580553 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001261512 |
Protein GI | 148553930 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.553727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0273902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATCG CAGGGCGGGT CGTGATCGTC ACGGGGGCCA GCAGCGGGAT CGGCGAGGCG GTCGCGCTGC GGCTCGCGCG GGAAGGCGCG GCGGTGGTCC TCGGCGCTCG GCGCGCGGAG CGGCTCGACG ATCTGGTCGC GCGGATCGCA GGCGAAGGCG GCGCGGTCGC GGCACGGGCC TGCGACGTGA CCCGGCGCGC CGACCTCGAA AGCCTCGCCG CCCTTGCGAT CGAGCGGTTC GGCCGGATCG ACGCGATCGT CAACAATGCC GGCGTCATGC CGATCTCTCG GCTCGACGTC TTCGACGTCG ACGGCTGGGA CCGGACGATC GACACCAATA TCAAGGGCGT GCTCTACGCG ATCGCCGCCG TGCTGCCGCA GATGAAGAAG CAGCGCGGCG GCCACATCAT CTCGATCGCT TCCGTGGCGG GGCACAAGGT CAACGGCGGC TCGGCGGTCT ATGCCGCCTC CAAATATGCG GTGCGCGTGA TCTCCGAGGC GCTGCGGCAG GAGGTGACGG CGGACGGCAT CCGCGTGACC GTGGTCTCCC CCGGCGCGAC CGAGAGCGAG CTGTTCGGCA AGATCCACGA CCCCGCCTCG CAGAAGCGCC TCGAAGGCGC GTCCGAGATC GCGCTGCCCG CCGACAGCGT CGCCCGGGCG ATCCTCTATG CGATGAACGA GCCCGACGCA GTCGACATCA ACGAGATCGT GATCCGCCCG CAGGCGCAGG AGATGTGA
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Protein sequence | MGIAGRVVIV TGASSGIGEA VALRLAREGA AVVLGARRAE RLDDLVARIA GEGGAVAARA CDVTRRADLE SLAALAIERF GRIDAIVNNA GVMPISRLDV FDVDGWDRTI DTNIKGVLYA IAAVLPQMKK QRGGHIISIA SVAGHKVNGG SAVYAASKYA VRVISEALRQ EVTADGIRVT VVSPGATESE LFGKIHDPAS QKRLEGASEI ALPADSVARA ILYAMNEPDA VDINEIVIRP QAQEM
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