| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1339 |
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| Symbol | |
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| ID | 5711897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1392438 |
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| End bp | 1393217 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641267251 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001532682 |
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| Protein GI | 159043888 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0406347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTTG GGATCAAGGG CAAGCGCGCG CTGGTCTGCG CGGCATCGAA AGGGTTGGGG
CGCGGCTGTG CCGAGGCGCT GGCCGAGGCC GGCGTGGACC TGGTGATCAA CGCCCGCGGC
GCCGAGGCGC TGGAGCAAAC CGCCACCGCG ATCCGCGATC GCCACGGGGT TGCGGTCACG
GCGGTCGCCG CCGACATCAC GTCCCAAGAC GGCCGCGCCG CGGTGCTCGA GGCCGCGGGC
GCGGTCGACA TCCTGGTGAC CAACGCGGGC GGGCCGCCCC CGGGCTTGTG GTCCGACTGG
GACCGGGATG ATTTCATCGC CGCCCTCGAC GGCAACATGC TGACCCCCAT CGCGCTGATG
AAAGCCTGCC TGCCGGGGAT GATCGACGCG GGCTGGGGCC GGGTGGTCAA CATCACCTCC
GGCTCGGTCA AGGCGCCGAT CCCGCAACTG GGCCTGTCCA ATGCCGCGCG CGCGGGGCTG
ACGGGCTATG TCGCCGGAAC CGCGCGGCAG GTGGCCCCCC ACGGGGTGAC GATCAACAAC
CTGCTGCCGG GCATCCACGC CACGGACCGC GCGATCATGC TCGATACCGG GGTCTCCAAA
GCCCAGGGCT GCACCCTCGA CGAGGCCCGC GCCCAACGGC AGGCCACGAT CCCCGCGCGC
CGCTACGGCA CCGCGGCCGA GTTCGGCGCG ACCTGCGCGT TTCTCTGCTC GCAGCACGCA
GGCTTCATCG TGGCCCAGAA CATCCTGGCC GATGGCGGCG CGATCAACGC CACGCTCTGA
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| Protein sequence | MDLGIKGKRA LVCAASKGLG RGCAEALAEA GVDLVINARG AEALEQTATA IRDRHGVAVT
AVAADITSQD GRAAVLEAAG AVDILVTNAG GPPPGLWSDW DRDDFIAALD GNMLTPIALM
KACLPGMIDA GWGRVVNITS GSVKAPIPQL GLSNAARAGL TGYVAGTARQ VAPHGVTINN
LLPGIHATDR AIMLDTGVSK AQGCTLDEAR AQRQATIPAR RYGTAAEFGA TCAFLCSQHA
GFIVAQNILA DGGAINATL
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