Gene Pfl01_2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2470 
Symbol 
ID3715288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2823698 
End bp2824432 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content59% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_348201 
Protein GI77458695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACA TTCAAAACAA AGTCGTCCTG ATTACCGGTG CAAGCAGTGG TATTGGCGAA 
GCAGCGGCCA GGTTGATTGC TGCCAAAGGC GCGCATGTGG TCCTCGGTGC CCGCCGCACC
GAGCGTCTGG ACAAACTGGT CAGCGAAATC CAGGCCGAAG GTGGCTCGGC AAGTGCCTGC
GCACTGGACG TTACGGATCT GCAATCGATG CACGCCTTCG TGGCGTTCGC CAAGACGCAA
CATGGCAAGG TCGATGTGAT CATCAACAAC GCGGGGGTGA TGCCTTTGTC TCCGCTGGCT
TCGTTGAAGG TCGATGAATG GAACCAGATG CTCGATGTCA ACGTTCGCGG TGTGCTACAC
GGTATTGCCG CCGTCTTGCC GGACATGCAG GCGCAGGGTT TCGGTCAGGT CATCAATATC
TCGTCCATTG GTGGACTCGC GGTTTCTCCG ACAGCGGCAG TGTACTGCGC GACCAAATTC
GCGGTCCGGG CTATCTCGGA TGGTCTGCGC CAGGAAACGG ACAAGATCCG GGTGACCGTG
GTGTGCCCGG GCGTCGTCGA GTCCGAACTG GCCGATACGA TTTCCGATGA GGTGGCACGC
GAGGAAATGA AAGCCTTCCG GCGTGTGGCG CTCAATGCAG ACGCCATTGC GCGGGCGCTC
ACCTATGCCA TCGAGCAGCC TGATGATGTG GACGTGAGTG AGATTGTGGT TCGTCCGACC
GCCAGCCCAC ACTGA
 
Protein sequence
MSNIQNKVVL ITGASSGIGE AAARLIAAKG AHVVLGARRT ERLDKLVSEI QAEGGSASAC 
ALDVTDLQSM HAFVAFAKTQ HGKVDVIINN AGVMPLSPLA SLKVDEWNQM LDVNVRGVLH
GIAAVLPDMQ AQGFGQVINI SSIGGLAVSP TAAVYCATKF AVRAISDGLR QETDKIRVTV
VCPGVVESEL ADTISDEVAR EEMKAFRRVA LNADAIARAL TYAIEQPDDV DVSEIVVRPT
ASPH