| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0389 |
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| Symbol | |
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| ID | 4602645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 483150 |
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| End bp | 483962 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779726 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_926270 |
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| Protein GI | 119773530 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGGCC TGATGGACAA GGTGGTGATT TTAACCGGGG CGTCGGAAGG TATTGGGCGG
GCACTGGCGA GAGAGCTTGC CAGGCTTGGC TGCCATCTGG TACTCACCGC CCGCAGCGAA
ACCCGGCTGC AGTCGTTGGC ACTGGAGTTG GCTCAGGAGC AGGGAGCACA GGCGGATGTT
CTTGTTCACA GCGCTGATCT TACTCATCCC CATGAATGTC GTGAGCTCAT CGATGCCTGT
ATCGCCCGCT TTGGGCGCCT CGATATTCTT ATCAACAACG CCGGTATGAC CATGTGGTCA
CGTTTCGATG AGCTGGAAGA TCTCGCCATT CTTGAACAGA TCATGGCCGT TAACTACCTC
GCACCGGCGC GCCTCACCCA CATGGCCTTG CCGCATTTGA AACACAGCCA GGGGCAGGTA
GTGGCCATCG CCTCAGTGGC AGGCCTGACA GGCGTGCCAA CCCGTAGCGG CTATGCTGCC
TCCAAACATG CCATGATGGG CTTCTTTGAT TCTCTCAGAA TCGAACTCGC CGATGACAAG
GTGGCCGTGA CCGTGATTTG CCCCGACTTT GTGGTATCGC AAATCCATAA GCGCGCACTG
GACGGCAAAG GGAATCCTCT TGGCACTACC CCAATGAAGG AAGACAAGAT AATGTCGGCC
GAAGCCTGTG CGGTAGCCAT GGTTCCGGCC ATCGCCTGCC GCGAGCGGTT ACTTATTATG
TCCCGCCGTG GCCGTCTTGG CCGCTGGGTG CGTTTGCTGT GGCCTTCACT GATAGATAAG
CTGGCCAAAA AGGCGATAGC CGGAGGGCAT TGA
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| Protein sequence | MDGLMDKVVI LTGASEGIGR ALARELARLG CHLVLTARSE TRLQSLALEL AQEQGAQADV
LVHSADLTHP HECRELIDAC IARFGRLDIL INNAGMTMWS RFDELEDLAI LEQIMAVNYL
APARLTHMAL PHLKHSQGQV VAIASVAGLT GVPTRSGYAA SKHAMMGFFD SLRIELADDK
VAVTVICPDF VVSQIHKRAL DGKGNPLGTT PMKEDKIMSA EACAVAMVPA IACRERLLIM
SRRGRLGRWV RLLWPSLIDK LAKKAIAGGH
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