Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_2878 |
Symbol | |
ID | 5152925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 2984453 |
End bp | 2985229 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640557757 |
Product | short chain dehydrogenase |
Protein accession | YP_001238911 |
Protein GI | 148254326 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.240803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0339025 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTTC ATCTGCGCGG CAAGCGCGTT CTCATCACCG GCGCCTCCAA GGGCATCGGC GCCGCAGCAG CGGAAGTGTT CGCCGAGGAA GGCTGCCACG TCCGCCTCGC GGCGCGCAGC GCCGACCGGC TCTCCGCGCT GGTCGAGCAG CTCAGGTCGA AGCATCAGAT CGATGCGGCG GCGCATGTGG TGGATCTGCG CAAATCCGAG GACGTCACCC GGCTGGCCCA AGAGGCCGCC GACATCGACA TCCTCGTCAA CAATGCGGGC GACATTCCGG GCGGGCCGAT CGACAAGATC GACGAGACGA CCTGGCGGCA CGCCTGGGAC TTGAAGGTGT TCGGCTTCAT CAACCTCACC AGGCTGGTCT ACGCACAGAT GAAGGCACGC GGATCGGGCG TGATCATCAA CGACATCGGC GCGGCCGGCG AGAAGTTCGA CGCCAACTAC ATCTGCGGCA GCGCCGGCAA TGCGGCGCTG ATGGCGTTCA CCAGGGCGCT CGGCTCCAAG AGCCTCGCCG ACAACATCCG CGTCGTCGGC ATCAATCCGG GGCCGGTGGG CACCGACCGC CACGTCACCC TGCTGAAGAC CCGCGCGCGA CAGCAATTCG GTGACGAGAG CCGCTACACG GAATTCCAGA AGGGCCTGCC GCTCGGCCGC CCCGCGCATG TCAGGGAGAT CGCCGACCTG ATGGCCTTCC TGGCATCCGA CCGTGCCGGC TACACGTCGG GCGTGATCTA TACCGTCGAC GGCGGCATCA GCGCAGGGTG GGGTTGA
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Protein sequence | MDLHLRGKRV LITGASKGIG AAAAEVFAEE GCHVRLAARS ADRLSALVEQ LRSKHQIDAA AHVVDLRKSE DVTRLAQEAA DIDILVNNAG DIPGGPIDKI DETTWRHAWD LKVFGFINLT RLVYAQMKAR GSGVIINDIG AAGEKFDANY ICGSAGNAAL MAFTRALGSK SLADNIRVVG INPGPVGTDR HVTLLKTRAR QQFGDESRYT EFQKGLPLGR PAHVREIADL MAFLASDRAG YTSGVIYTVD GGISAGWG
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