| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3195 |
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| Symbol | |
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| ID | 3963065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3535439 |
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| End bp | 3536233 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918014 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_524435 |
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| Protein GI | 89901964 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.857266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAG GTATTGCCGG TAAATGGGCC TTGGTGTGCG GTGCCAGCAA GGGTTTGGGC
TTCGGTTGTG CCGAGGCGCT GGTGCGCGAA GGGGTGAACG TGCTGCTGGT GGCTCGAGGC
GCCGCGGTGC TGCAGGCTTC TGCTTCTAAA TTAATAGCTG AATACGCAGG TAACACGGGG
GCTACAGTCC AGTTTGTTGC TGAAGATATT ACAACGCCGC AAGGCCGGCA AGCGGTATTT
GCCGCGCGCA GCGACTTTGA TATTGTGGTC ACCAATGCTG GGGGCCCGCC GACCGGCGAC
TTTCGCGATT GGGACCGCGA TGCCTGGATC CGGGCGGTGG ATGCCAATAT GCTGACGCCG
ATTGAGTTGA TCAAGGCCAC GGTGGACGGC ATGGCGGCGC GCGGCTTTGG CCGCATCGTC
AACATCACCT CCGGCGCGGT GAAGGCGCCG ATCGACATCC TGGGCTTGTC CAACGGTGCC
CGCAGCGGTT TGACCGGCTT TGTGGCCGGT GTGGCGCGCA GCCCACTTGC GGCGCACGGT
GTGACCATCA ACAATCTGCT GCCCGGTGCG TTCGACACCG ATCGTCTGAG AGGCGTCATG
CAGGGCGCAG CGCAAAAAAC CAGCCAAGCC CTTGATGTTG TCATGGCCGC ACGTCGCAAC
ACCATCCCGG CGCGGCGCTT TGGCACGGTG GAAGAATTTG GCGCCATCTG TGCCTTCCTG
TGCAGCCAGC AGGCCGGTTA TATCAACGGT CAGAATGTGC TGGCTGACGG TGGCGCCTAT
CCGGGCACGT TTTAG
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| Protein sequence | MDLGIAGKWA LVCGASKGLG FGCAEALVRE GVNVLLVARG AAVLQASASK LIAEYAGNTG
ATVQFVAEDI TTPQGRQAVF AARSDFDIVV TNAGGPPTGD FRDWDRDAWI RAVDANMLTP
IELIKATVDG MAARGFGRIV NITSGAVKAP IDILGLSNGA RSGLTGFVAG VARSPLAAHG
VTINNLLPGA FDTDRLRGVM QGAAQKTSQA LDVVMAARRN TIPARRFGTV EEFGAICAFL
CSQQAGYING QNVLADGGAY PGTF
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