Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1537 |
Symbol | |
ID | 4180582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 1655492 |
End bp | 1656271 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638067428 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_674098 |
Protein GI | 110633890 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.460679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTGG GTATCGCCGG GAAGAACGCT ATCGTATGCG CATCAAGCCG GGGGCTCGGC CGCGGTTGCG CCATGGCTCT GGCGGAAGCA GGCTGCAATC TGGTCGTCAA CGGCCGCGAC CCACAGAAGC TGCAGGAGAC GGCGGAGGAA ATTCGGGATC GGTTCGGCGT TTCGGTGACT GCGGTTGCGG CGGATGTCTC GACTCACGAG GGCCAGAAGG CGCTGCTCTC CGCATGTCCT GCGCCGGACA TTCTCGTCAA CAACAATGCC GGTCCGCCGC TCAAGGATTT TAGGGCGCTC ACGCGGGAGG AACTCCTCAA AGGCGTGACG CAGAACATGG TTACCCCGCT GGAGCTGATC CAAGCCACCG TGACGGGAAT GACCGAGCGG GGCTTCGGGC GCATCGTCAA CATCACCTCG CTTTCGGTTT ACATGCCGAT TGCCGGCCTT GATCTCTCCT CCGGCGCGCG GGCTGGCCTT ACCGCCTTTC TTGCTGGCGT TGCGCGCAAC GTGGCGGGAA AAGGGGTGAC GATCAACAAT CTTCTGCCGG GAAAATTCGG AACCGACCGA CTCCACAGCA ATATCAAGAA TGCTGCCGAA AAAGCCGGCC GCTCATTTGA GGAACAGGCA GAAAAGCAGG CTTCGGAGGT GCCCGCCGGC CGCTTCGGCA CGCCGGAGGA GTTCGGGCAG GTCTGTGCCT TTTTGTGTTC CGTCCATGCT GGCTATCTGA CCGGCCAGAA TATCCGGCTC GATGGCGGCC TCTTCCCCAG CGCATTCTGA
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Protein sequence | MDLGIAGKNA IVCASSRGLG RGCAMALAEA GCNLVVNGRD PQKLQETAEE IRDRFGVSVT AVAADVSTHE GQKALLSACP APDILVNNNA GPPLKDFRAL TREELLKGVT QNMVTPLELI QATVTGMTER GFGRIVNITS LSVYMPIAGL DLSSGARAGL TAFLAGVARN VAGKGVTINN LLPGKFGTDR LHSNIKNAAE KAGRSFEEQA EKQASEVPAG RFGTPEEFGQ VCAFLCSVHA GYLTGQNIRL DGGLFPSAF
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