Gene Meso_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1537 
Symbol 
ID4180582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1655492 
End bp1656271 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content62% 
IMG OID638067428 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_674098 
Protein GI110633890 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.460679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTGG GTATCGCCGG GAAGAACGCT ATCGTATGCG CATCAAGCCG GGGGCTCGGC 
CGCGGTTGCG CCATGGCTCT GGCGGAAGCA GGCTGCAATC TGGTCGTCAA CGGCCGCGAC
CCACAGAAGC TGCAGGAGAC GGCGGAGGAA ATTCGGGATC GGTTCGGCGT TTCGGTGACT
GCGGTTGCGG CGGATGTCTC GACTCACGAG GGCCAGAAGG CGCTGCTCTC CGCATGTCCT
GCGCCGGACA TTCTCGTCAA CAACAATGCC GGTCCGCCGC TCAAGGATTT TAGGGCGCTC
ACGCGGGAGG AACTCCTCAA AGGCGTGACG CAGAACATGG TTACCCCGCT GGAGCTGATC
CAAGCCACCG TGACGGGAAT GACCGAGCGG GGCTTCGGGC GCATCGTCAA CATCACCTCG
CTTTCGGTTT ACATGCCGAT TGCCGGCCTT GATCTCTCCT CCGGCGCGCG GGCTGGCCTT
ACCGCCTTTC TTGCTGGCGT TGCGCGCAAC GTGGCGGGAA AAGGGGTGAC GATCAACAAT
CTTCTGCCGG GAAAATTCGG AACCGACCGA CTCCACAGCA ATATCAAGAA TGCTGCCGAA
AAAGCCGGCC GCTCATTTGA GGAACAGGCA GAAAAGCAGG CTTCGGAGGT GCCCGCCGGC
CGCTTCGGCA CGCCGGAGGA GTTCGGGCAG GTCTGTGCCT TTTTGTGTTC CGTCCATGCT
GGCTATCTGA CCGGCCAGAA TATCCGGCTC GATGGCGGCC TCTTCCCCAG CGCATTCTGA
 
Protein sequence
MDLGIAGKNA IVCASSRGLG RGCAMALAEA GCNLVVNGRD PQKLQETAEE IRDRFGVSVT 
AVAADVSTHE GQKALLSACP APDILVNNNA GPPLKDFRAL TREELLKGVT QNMVTPLELI
QATVTGMTER GFGRIVNITS LSVYMPIAGL DLSSGARAGL TAFLAGVARN VAGKGVTINN
LLPGKFGTDR LHSNIKNAAE KAGRSFEEQA EKQASEVPAG RFGTPEEFGQ VCAFLCSVHA
GYLTGQNIRL DGGLFPSAF