| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1207 |
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| Symbol | |
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| ID | 3933651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1167701 |
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| End bp | 1168480 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637903555 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_509149 |
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| Protein GI | 89053698 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAG GGATCAAGGG ACGCCGCGCA CTGGTCTGCG CGTCATCAAA GGGTCTGGGC
CGGGGCTGCG CGGAGGCGCT GGCCGAGGCG GGCGTGGATC TGGTGCTGAA TGCGCGCGGC
GCGGAGGCGC TAGAGGAGAC GGCGCAGGCC ATCCGCGACA CCTATGGCGT GTCGGTGACG
GCTGCGGCCG CCGACATCAC GTCAGAGAAG GGTCGCGCGC GCGTGCTGGC CGAGGCTGCT
GGCGTTGACA TCCTGGTGAC GAATGCGGGC GGACCGCCGC CGGGGCTGTG GTCCGACTGG
GGCCGCGATG ACTTCATCGC CGCGCTGGAC GCCAATATGC TGGCGCCCAT TGCGCTGATG
ACCGAGTTGA TGCCTGCGAT GATCGACAAC GGCTGGGGCC GCGTCGTCAA TATCACCTCG
CAATCGGTAA AGGCACCGAT CCCGGCACTG GGGCTGTCCA ATGCCGCGCG CACCGGTCTG
ACCGGTTACG TGGCGGGCAC CGCGCGCCAG GTCGCGCCCT TTGGGGTGAA CGTCAACAAT
TTGCTTCCGG GCATTCATGC CACGGACCGG GCCATACAAC TGGACGGCGG CGTTTCCCAG
AAAGAGGGCA TTAGCATGGA TAAGGCGAAG GCCCGCCGCG AATTAACGAT TCCCGCTCGC
CGCTATGGCA CCCGCGCCGA GTTCGGGGCG ATGTGCGCGT TTTTATGCTC GGAACATGCG
GGCTTCATCG TGGGCCAGAA CATCCTGTGC GACGGCGGCG GCACCAACGC GACAATCTAG
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| Protein sequence | MDLGIKGRRA LVCASSKGLG RGCAEALAEA GVDLVLNARG AEALEETAQA IRDTYGVSVT
AAAADITSEK GRARVLAEAA GVDILVTNAG GPPPGLWSDW GRDDFIAALD ANMLAPIALM
TELMPAMIDN GWGRVVNITS QSVKAPIPAL GLSNAARTGL TGYVAGTARQ VAPFGVNVNN
LLPGIHATDR AIQLDGGVSQ KEGISMDKAK ARRELTIPAR RYGTRAEFGA MCAFLCSEHA
GFIVGQNILC DGGGTNATI
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