| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1243 |
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| Symbol | |
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| ID | 4901102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 1220216 |
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| End bp | 1220995 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640134473 |
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| Product | short chain dehydrogenase/reductase family oxidoreductase |
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| Protein accession | YP_001065522 |
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| Protein GI | 126452270 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00809972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTGG GAATCGCAGG ACGGACCGCG CTCGTGTGCG CGGCCAGCAA GGGGCTCGGG
CGCGGTTGCG CGCAGGCGCT CGCCGCCGAG GGCGCGCGGC TCGTGATCGT CGCGCGCACG
CGCGAGACGC TCGAGGCCGC CGCGGCCGAT ATTCGCGCGG CGACGGGCGC CGACGTGACG
GCCGTCGCGT GCGACATCAC GACGCCCGAG GGGCGCGCGG CGGCGCTCGC CGCATGCCCG
CAGCCGGACA TTCTCGTGAC GAACGCGGGC GGCCCGCCGC CGGGCGACTT CCGCGATTTC
ACGCACGACG ACTGGATTCG CGCGCTCGAG GCGAACATGC TCACGCCGAT CGAGCTGATC
CGCGCGAGCG TCGACGGGAT GATCGCGCGC CGCTTCGGGC GCGTCGTCAA CATCACGAGC
TCGGCCGTGA AGGCGCCGAT CGACGTGCTC GCGCTGTCCA ACGGCGCGCG CTCGGGGCTC
ACGGGCTTCG TCGCGGGGCT CGCGCGCAAG GTGGCCGAGC ACAACGTGAC GATCAACAAC
CTGCTGCCGG GCCTCTTCGA CACCGACCGG ATCGCGACGA CGCTCGCCGC GGCGGCGCAG
GCGCAGGGCG CGACCGTCGA CGAGCTGCGC GCGCGGCGCA CGAAGGAAAT TCCGGCGAAG
CGCCTCGGCA CGCCGCACGA GTTCGGCGCG GCGTGCGCGT TCCTCTGCAG TGTCCATGCG
GGCTACATCA CCGGGCAGAA CTGGCTGCTC GACGGCGGCG CGTATCCCGG CACATTTTGA
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| Protein sequence | MDLGIAGRTA LVCAASKGLG RGCAQALAAE GARLVIVART RETLEAAAAD IRAATGADVT
AVACDITTPE GRAAALAACP QPDILVTNAG GPPPGDFRDF THDDWIRALE ANMLTPIELI
RASVDGMIAR RFGRVVNITS SAVKAPIDVL ALSNGARSGL TGFVAGLARK VAEHNVTINN
LLPGLFDTDR IATTLAAAAQ AQGATVDELR ARRTKEIPAK RLGTPHEFGA ACAFLCSVHA
GYITGQNWLL DGGAYPGTF
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