| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2540 |
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| Symbol | |
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| ID | 1045822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2884533 |
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| End bp | 2885309 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637145963 |
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| Product | short chain dehydrogenase/reductase family oxidoreductase |
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| Protein accession | NP_744685 |
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| Protein GI | 26989260 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00698134 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATCTAG GCATCACCGG CCGCTGGGCC ATCGTCTGCG CGGCCAGCCA AGGCCTTGGC
AAAGGCTGCG CCGAAGCGCT GGGCAAAGAA GGCGTCAACC TGGTCATCAA TGCCCGTACC
CAAGCCACTC TGGAGCAGAC CGCCAGCGAG TTGCGCAGGG CCTGCCCGGG AATCGAGGTC
CATACCGTGG CAGGCGATGT TGCCGATCCC AAGGTGCGCC AGGCGCTGTT GGCGGCCTGC
CCGCAGGTCG ACATTCTGGT CAACAACGCC GGTGGCCCGC CACCGGGGGA CTTCCGTGAT
TGGGGGCGTG ATGACTGGCT GAAGGCGCTG GACGCCAACA TGCTCACGCC CATCGAGCTG
ATCAAGGCGG TGGTAGATGG CATGGCCGAG CGTGGTTTTG GCCGGGTGGT GAATATCACC
TCCGGCGCGG TGAAGGCACC GATCGACATG CTGGGTTTAT CCAACGGTGC CCGCAGTGGC
CTGACCGGAT TCATTGCCGG CCTGGCCCGG CAGCAGCGTC TGGCGGGCTG CAATGTGACA
CTCAACAACC TGTTGCCTGG GGCGTTCGAC ACGGCGCGCC TGCAAAAGAC CTTGAAGGCT
GCGGGTGGTG ATGTGGAAGT CACTGCCCAG GCGCGGCGCA AGGCAATTCC GGCGTCGCGT
TTTGGCGATG CCGCAGAGTT TGGCGCGTAT TGCGCATTTC TGTGCAGCGC GCATGCCGGG
TACATCACCG GGCAGAACCT GCTGATCGAT GGCGGGGCGT ACCCCGGAAC CTACTGA
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| Protein sequence | MDLGITGRWA IVCAASQGLG KGCAEALGKE GVNLVINART QATLEQTASE LRRACPGIEV
HTVAGDVADP KVRQALLAAC PQVDILVNNA GGPPPGDFRD WGRDDWLKAL DANMLTPIEL
IKAVVDGMAE RGFGRVVNIT SGAVKAPIDM LGLSNGARSG LTGFIAGLAR QQRLAGCNVT
LNNLLPGAFD TARLQKTLKA AGGDVEVTAQ ARRKAIPASR FGDAAEFGAY CAFLCSAHAG
YITGQNLLID GGAYPGTY
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