Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2330 |
Symbol | |
ID | 4309127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2567715 |
End bp | 2568494 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638150164 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_774220 |
Protein GI | 115352381 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATCTCG GCATCGCAGG AAAGACCGCC CTCGTGTGCG CGGCGAGCAA GGGCCTCGGG CGCGGCTGCG CGGAAGCGCT GGCCGCCGAG GGCGTGAATC TCGTGATCGT CGCGCGCACG CGCGACACGC TGGAGGAAAC AGCCGAGGAG ATCCGCGCCG CGTCGAATGT GTCGGTCACT GCCGTCGCAT GCGACATCAC GACGCCCGAC GGGCGCGCGG CCGCGCTCGC CGCCTGCCCG CAGCCGGATA TTCTCGTGAA CAATGCGGGC GGCCCGCCGC CCGGCGACTT CCGCGATTTC TCGCATGACG ACTGGATCCG CGCGCTCGAG GCGAACATGC TGACGCCGAT CGAGCTGATC CGCGCGACCG TCGACGGGAT GATCGGGCGC GGCTTCGGCC GGATCGTCAA TATCACGAGT TCGGCCGTGA AGGCGCCGAT CGACGTGCTT GCGCTGTCGA ACGGCGCGCG CTCGGGGCTG ACCGGCTTCG TCGCGGGGCT GTCGCGCAAG GTCGCCGGCC AGGGCGTGAC GATCAACAAC CTGCTGCCGG GGCTGTTCGA CACCGACCGG ATCGCGACGA CGCTTGCCGC GTCGGCGAAG GCGCAGGGCG TGACGGTCGA CGAGCTGCGC GCGCGGCGCG CGAAGGAGAT CCCGGCCGGG CGCCTCGGCA CGCGTGCCGA ATTCGGCGCC GCGTGCGCGT TTCTCTGCAG CGTGCATGCC GGCTATATCA CCGGGCAGAA CTGGCTGCTC GACGGCGGCG CGTATCCGGG CACGTTCTGA
|
Protein sequence | MDLGIAGKTA LVCAASKGLG RGCAEALAAE GVNLVIVART RDTLEETAEE IRAASNVSVT AVACDITTPD GRAAALAACP QPDILVNNAG GPPPGDFRDF SHDDWIRALE ANMLTPIELI RATVDGMIGR GFGRIVNITS SAVKAPIDVL ALSNGARSGL TGFVAGLSRK VAGQGVTINN LLPGLFDTDR IATTLAASAK AQGVTVDELR ARRAKEIPAG RLGTRAEFGA ACAFLCSVHA GYITGQNWLL DGGAYPGTF
|
| |