More than 300 homologs were found in PanDaTox collection
for query gene Tpau_1009 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_1009  two component transcriptional regulator, LuxR family  100 
 
 
214 aa  412  1e-114  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.849645  n/a   
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  57.6 
 
 
218 aa  221  4.9999999999999996e-57  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.254077 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  57.75 
 
 
218 aa  212  2.9999999999999995e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_009664  Krad_2518  two component transcriptional regulator, LuxR family  58.14 
 
 
225 aa  209  3e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  56.34 
 
 
215 aa  206  2e-52  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  53.92 
 
 
215 aa  203  2e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  53.52 
 
 
215 aa  202  2e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  53.99 
 
 
218 aa  202  5e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  53.77 
 
 
232 aa  199  1.9999999999999998e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_013595  Sros_8800  response regulator receiver protein  55.19 
 
 
215 aa  199  3e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.752334  normal 
 
 
-
 
NC_013947  Snas_5550  two component transcriptional regulator, LuxR family  52.36 
 
 
213 aa  197  1.0000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.159917  normal  0.0692801 
 
 
-
 
NC_013595  Sros_7377  response regulator receiver protein  55.25 
 
 
216 aa  196  3e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.92051  normal 
 
 
-
 
NC_013947  Snas_0607  two component transcriptional regulator, LuxR family  54.34 
 
 
216 aa  196  3e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6306  response regulator receiver protein  51.66 
 
 
209 aa  194  8.000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0259699  normal  0.0492304 
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  52.11 
 
 
215 aa  193  1e-48  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3004  two component transcriptional regulator, LuxR family  51.61 
 
 
223 aa  192  3e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0522265  n/a   
 
 
-
 
NC_009921  Franean1_3846  two component LuxR family transcriptional regulator  53.7 
 
 
249 aa  189  2.9999999999999997e-47  Frankia sp. EAN1pec  Bacteria  normal  0.525033  normal  0.770826 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  49.53 
 
 
224 aa  188  5.999999999999999e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  49.55 
 
 
229 aa  187  7e-47  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  48.79 
 
 
225 aa  185  4e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  47.91 
 
 
218 aa  185  5e-46  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4001  two component transcriptional regulator, LuxR family  48.84 
 
 
217 aa  184  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.380782  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  49.76 
 
 
216 aa  182  3e-45  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  49.53 
 
 
220 aa  179  2e-44  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  49.77 
 
 
221 aa  179  2e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  46.01 
 
 
261 aa  178  5.999999999999999e-44  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  47.47 
 
 
217 aa  178  7e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  46.82 
 
 
227 aa  177  8e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  46.95 
 
 
218 aa  177  1e-43  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  44.39 
 
 
228 aa  177  1e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  46.33 
 
 
239 aa  176  3e-43  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  48.37 
 
 
241 aa  176  3e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  46.05 
 
 
228 aa  175  5e-43  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  45.54 
 
 
225 aa  175  5e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013093  Amir_3219  two component transcriptional regulator, LuxR family  52.17 
 
 
208 aa  175  6e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  47.42 
 
 
221 aa  175  6e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  43.98 
 
 
224 aa  174  9.999999999999999e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  47.42 
 
 
225 aa  173  9.999999999999999e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  44.5 
 
 
226 aa  173  1.9999999999999998e-42  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  44.86 
 
 
230 aa  173  1.9999999999999998e-42  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  46.79 
 
 
227 aa  173  1.9999999999999998e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  44.76 
 
 
218 aa  173  1.9999999999999998e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  48.58 
 
 
225 aa  172  2.9999999999999996e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  49.27 
 
 
230 aa  172  3.9999999999999995e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  46.3 
 
 
230 aa  172  3.9999999999999995e-42  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  49.06 
 
 
217 aa  172  3.9999999999999995e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  46.82 
 
 
228 aa  172  5e-42  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  48.85 
 
 
225 aa  171  5.999999999999999e-42  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  45.07 
 
 
226 aa  171  5.999999999999999e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  45.87 
 
 
228 aa  171  7.999999999999999e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  47.42 
 
 
234 aa  171  9e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  45.62 
 
 
230 aa  170  1e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  45.41 
 
 
241 aa  170  2e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  48.29 
 
 
213 aa  169  2e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  41.56 
 
 
248 aa  169  2e-41  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  43.52 
 
 
219 aa  169  2e-41  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  46.73 
 
 
220 aa  169  3e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  47.22 
 
 
220 aa  169  3e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  47.42 
 
 
222 aa  169  4e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  43.4 
 
 
221 aa  168  5e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  46.58 
 
 
223 aa  168  5e-41  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.17 
 
 
225 aa  168  5e-41  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  49.08 
 
 
226 aa  168  6e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  45.78 
 
 
249 aa  167  8e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  45.79 
 
 
219 aa  167  1e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  44.13 
 
 
233 aa  167  2e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.64 
 
 
222 aa  166  2e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  45.58 
 
 
219 aa  166  2e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  45.33 
 
 
218 aa  166  2e-40  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  47.22 
 
 
221 aa  166  2.9999999999999998e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  44.75 
 
 
225 aa  166  2.9999999999999998e-40  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  44.44 
 
 
219 aa  166  4e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  47.64 
 
 
211 aa  165  4e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  42.11 
 
 
231 aa  165  5e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  44.75 
 
 
226 aa  165  5e-40  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  45.16 
 
 
226 aa  165  5.9999999999999996e-40  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  45.62 
 
 
220 aa  165  5.9999999999999996e-40  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  45.58 
 
 
219 aa  165  5.9999999999999996e-40  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  44.39 
 
 
239 aa  164  9e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  47.93 
 
 
221 aa  164  1.0000000000000001e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  37.5 
 
 
261 aa  164  1.0000000000000001e-39  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  47.2 
 
 
214 aa  164  1.0000000000000001e-39  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  45.79 
 
 
224 aa  163  1.0000000000000001e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  42.86 
 
 
242 aa  164  1.0000000000000001e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  44.08 
 
 
226 aa  164  1.0000000000000001e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  45.95 
 
 
227 aa  163  2.0000000000000002e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  44.65 
 
 
236 aa  162  2.0000000000000002e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  45.02 
 
 
225 aa  163  2.0000000000000002e-39  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.96 
 
 
222 aa  162  3e-39  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  42.33 
 
 
215 aa  162  4.0000000000000004e-39  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  42.25 
 
 
220 aa  162  4.0000000000000004e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  43.06 
 
 
230 aa  162  4.0000000000000004e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  41.78 
 
 
224 aa  162  4.0000000000000004e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  45.79 
 
 
214 aa  162  5.0000000000000005e-39  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  41.53 
 
 
250 aa  161  6e-39  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  44.14 
 
 
226 aa  161  6e-39  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  41.18 
 
 
233 aa  161  6e-39  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  46.95 
 
 
229 aa  161  7e-39  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.58 
 
 
222 aa  161  7e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_012669  Bcav_3028  two component transcriptional regulator, LuxR family  46.76 
 
 
225 aa  161  7e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.211566  decreased coverage  0.0000266978 
 
 
-
 
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