More than 300 homologs were found in PanDaTox collection
for query gene SO_1385 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004347  SO_1385  methyl-accepting chemotaxis protein  100 
 
 
520 aa  1077    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  86.97 
 
 
533 aa  932    Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  87.36 
 
 
522 aa  933    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3519  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  63.26 
 
 
514 aa  676    Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  61 
 
 
517 aa  641    Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  85.06 
 
 
522 aa  917    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  86.97 
 
 
522 aa  930    Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  86.4 
 
 
522 aa  928    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  62.62 
 
 
514 aa  635    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  93.1 
 
 
522 aa  1003    Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  92.91 
 
 
522 aa  1004    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  93.3 
 
 
522 aa  1005    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  42.09 
 
 
511 aa  382  1e-105  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0602  methyl-accepting chemotaxis protein  39.76 
 
 
536 aa  366  1e-100  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2247  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.61 
 
 
511 aa  356  5.999999999999999e-97  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1621  methyl-accepting chemotaxis protein  37.87 
 
 
513 aa  345  1e-93  Colwellia psychrerythraea 34H  Bacteria  normal  0.113175  n/a   
 
 
-
 
NC_009784  VIBHAR_06258  hypothetical protein  36.47 
 
 
520 aa  337  1.9999999999999998e-91  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000496  methyl-accepting chemotaxis protein  37.82 
 
 
520 aa  333  5e-90  Vibrio sp. Ex25  Bacteria  normal  0.0232366  n/a   
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  39.06 
 
 
521 aa  318  2e-85  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_44300  aerotaxis receptor Aer  38.45 
 
 
521 aa  314  2.9999999999999996e-84  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.11 
 
 
521 aa  309  8e-83  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_002947  PP_2111  aerotaxis receptor Aer-2  36.52 
 
 
521 aa  306  8.000000000000001e-82  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.05 
 
 
521 aa  304  2.0000000000000002e-81  Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  36.97 
 
 
521 aa  304  2.0000000000000002e-81  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.14 
 
 
523 aa  300  5e-80  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  39.11 
 
 
521 aa  297  3e-79  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  34.67 
 
 
518 aa  296  8e-79  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3406  PAS  37.37 
 
 
521 aa  293  7e-78  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  36.13 
 
 
524 aa  290  5.0000000000000004e-77  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  36.74 
 
 
521 aa  289  7e-77  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  35.67 
 
 
515 aa  288  1e-76  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  37.13 
 
 
521 aa  288  1e-76  Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.33 
 
 
526 aa  287  4e-76  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.76 
 
 
521 aa  286  4e-76  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.95 
 
 
524 aa  286  5e-76  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  37.29 
 
 
521 aa  286  5e-76  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  36.67 
 
 
521 aa  285  1.0000000000000001e-75  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  34.79 
 
 
521 aa  285  1.0000000000000001e-75  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.35 
 
 
521 aa  283  5.000000000000001e-75  Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_003910  CPS_3929  methyl-accepting chemotaxis protein  33.67 
 
 
505 aa  281  2e-74  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36 
 
 
521 aa  281  3e-74  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  36.8 
 
 
529 aa  279  7e-74  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4451  methyl-accepting chemotaxis sensory transducer  36.91 
 
 
531 aa  279  1e-73  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  36.69 
 
 
534 aa  277  3e-73  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_4521  aerotaxis receptor, putative  36.49 
 
 
521 aa  275  1.0000000000000001e-72  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  35.79 
 
 
538 aa  275  1.0000000000000001e-72  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  33.79 
 
 
522 aa  275  2.0000000000000002e-72  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.42 
 
 
521 aa  275  2.0000000000000002e-72  Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_011138  MADE_03783  Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)  35.27 
 
 
527 aa  274  3e-72  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.31 
 
 
522 aa  273  4.0000000000000004e-72  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  36.23 
 
 
522 aa  270  2.9999999999999997e-71  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_007005  Psyr_3735  PAS  34.86 
 
 
521 aa  271  2.9999999999999997e-71  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36 
 
 
522 aa  271  2.9999999999999997e-71  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.27 
 
 
516 aa  271  2.9999999999999997e-71  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_013457  VEA_001512  aerotaxis sensor receptor protein  35.61 
 
 
516 aa  270  5.9999999999999995e-71  Vibrio sp. Ex25  Bacteria  normal  0.961146  n/a   
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.9 
 
 
522 aa  269  8e-71  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3073  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.33 
 
 
522 aa  269  8.999999999999999e-71  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000166485 
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  33.91 
 
 
518 aa  268  1e-70  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  36.03 
 
 
522 aa  269  1e-70  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_008740  Maqu_0389  methyl-accepting chemotaxis sensory transducer  40.71 
 
 
419 aa  268  2e-70  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1317  methyl-accepting chemotaxis sensory transducer  35.33 
 
 
522 aa  267  4e-70  Shewanella baltica OS195  Bacteria  normal  normal  0.0176898 
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  34.27 
 
 
532 aa  267  4e-70  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3270  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
532 aa  267  4e-70  Marinobacter aquaeolei VT8  Bacteria  normal  0.415489  n/a   
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  35.19 
 
 
522 aa  266  5e-70  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_3782  methyl-accepting chemotaxis sensory transducer  34.58 
 
 
524 aa  263  6e-69  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3294  methyl-accepting chemotaxis sensory transducer  34.79 
 
 
524 aa  262  1e-68  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  34.25 
 
 
521 aa  261  2e-68  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.45 
 
 
527 aa  261  2e-68  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
524 aa  261  3e-68  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.92 
 
 
524 aa  260  4e-68  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  35.43 
 
 
532 aa  260  4e-68  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0543  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
524 aa  260  5.0000000000000005e-68  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3725  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.64 
 
 
524 aa  260  5.0000000000000005e-68  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.16 
 
 
524 aa  259  7e-68  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.16 
 
 
524 aa  259  8e-68  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  32.71 
 
 
524 aa  256  9e-67  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_0337  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.27 
 
 
517 aa  253  4.0000000000000004e-66  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2159  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.56 
 
 
523 aa  253  6e-66  Shewanella loihica PV-4  Bacteria  normal  0.416992  normal  0.881373 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  33.02 
 
 
557 aa  247  4e-64  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_009092  Shew_2577  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.47 
 
 
524 aa  244  3.9999999999999997e-63  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0262  methyl-accepting chemotaxis sensory transducer  33.2 
 
 
524 aa  242  1e-62  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3295  methyl-accepting chemotaxis sensory transducer  33.27 
 
 
519 aa  233  5e-60  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.59 
 
 
598 aa  232  1e-59  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3460  methyl-accepting chemotaxis sensory transducer  31.44 
 
 
520 aa  231  2e-59  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  30.57 
 
 
523 aa  228  2e-58  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_011992  Dtpsy_2648  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.35 
 
 
520 aa  226  7e-58  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1363  PAS  29.92 
 
 
544 aa  224  3e-57  Dechloromonas aromatica RCB  Bacteria  normal  hitchhiker  0.000284571 
 
 
-
 
NC_007404  Tbd_2406  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.33 
 
 
566 aa  223  9e-57  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5286  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.85 
 
 
519 aa  218  1e-55  Delftia acidovorans SPH-1  Bacteria  normal  0.982796  normal 
 
 
-
 
NC_008543  Bcen2424_5364  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.61 
 
 
514 aa  213  4.9999999999999996e-54  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.12 
 
 
556 aa  213  5.999999999999999e-54  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4715  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.61 
 
 
514 aa  213  7e-54  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3002  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.42 
 
 
514 aa  210  5e-53  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_5244  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.42 
 
 
514 aa  210  6e-53  Burkholderia ambifaria MC40-6  Bacteria  normal  0.362794  normal 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.48 
 
 
551 aa  209  8e-53  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_009436  Ent638_2094  methyl-accepting chemotaxis sensory transducer  30.96 
 
 
511 aa  208  2e-52  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4906  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.03 
 
 
514 aa  207  5e-52  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0618  methyl-accepting chemotaxis protein  30.33 
 
 
583 aa  207  5e-52  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1618  methyl-accepting chemotaxis protein  30.25 
 
 
526 aa  206  6e-52  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2845  methyl-accepting chemotaxis protein  30.25 
 
 
526 aa  206  7e-52  Yersinia pestis Angola  Bacteria  normal  normal  0.208852 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>