More than 300 homologs were found in PanDaTox collection
for query gene Rleg_2077 on replicon NC_012850
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_3585  Carbamoyl-phosphate synthase L chain ATP-binding  64.09 
 
 
671 aa  837    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.930093  n/a   
 
 
-
 
NC_009667  Oant_2002  carbamoyl-phosphate synthase L chain ATP-binding  65.88 
 
 
667 aa  872    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.548064  n/a   
 
 
-
 
NC_011369  Rleg2_1874  Carbamoyl-phosphate synthase L chain ATP-binding  93.16 
 
 
669 aa  1267    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0599498 
 
 
-
 
NC_004310  BR1189  propionyl-CoA carboxylase, alpha subunit  65.93 
 
 
667 aa  878    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_2996  carbamoyl-phosphate synthase L chain ATP-binding  64.79 
 
 
684 aa  831    Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011370  Rleg2_6137  Carbamoyl-phosphate synthase L chain ATP-binding  64.04 
 
 
667 aa  841    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.768375  normal  0.18157 
 
 
-
 
NC_008576  Mmc1_0385  carbamoyl-phosphate synthase L chain, ATP-binding  55.26 
 
 
652 aa  694    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_3483  acetyl-CoA carboxylase, biotin carboxylase  60.5 
 
 
662 aa  755    Thauera sp. MZ1T  Bacteria  normal  0.569614  n/a   
 
 
-
 
NC_011894  Mnod_1878  Carbamoyl-phosphate synthase L chain ATP-binding  65.79 
 
 
673 aa  853    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.241293  n/a   
 
 
-
 
NC_010531  Pnec_0929  acetyl-CoA carboxylase, biotin carboxylase  57.79 
 
 
678 aa  722    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_3684  carbamoyl-phosphate synthase L chain, ATP-binding  63.15 
 
 
685 aa  836    Paracoccus denitrificans PD1222  Bacteria  normal  0.82326  normal 
 
 
-
 
NC_008825  Mpe_A1017  propionyl-CoA carboxylase, alpha subunit  57.39 
 
 
675 aa  721    Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.848501 
 
 
-
 
NC_010505  Mrad2831_2750  carbamoyl-phosphate synthase L chain ATP-binding  65.14 
 
 
667 aa  827    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0185011  normal  0.216435 
 
 
-
 
NC_007298  Daro_4003  Acetyl-CoA carboxylase, biotin carboxylase  57.33 
 
 
667 aa  718    Dechloromonas aromatica RCB  Bacteria  normal  0.666441  normal  0.37304 
 
 
-
 
NC_010524  Lcho_2693  carbamoyl-phosphate synthase L chain ATP-binding  56.49 
 
 
691 aa  717    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.25688 
 
 
-
 
NC_009720  Xaut_4726  carbamoyl-phosphate synthase L chain ATP-binding  65 
 
 
675 aa  865    Xanthobacter autotrophicus Py2  Bacteria  normal  0.248111  normal  0.179012 
 
 
-
 
NC_007406  Nwi_1736  propionyl-coenzyme A carboxylase alpha polypeptide  62.48 
 
 
671 aa  822    Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.124901 
 
 
-
 
NC_008781  Pnap_2379  acetyl-CoA carboxylase, biotin carboxylase  56.02 
 
 
682 aa  697    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.315609  normal 
 
 
-
 
NC_009485  BBta_4902  putative acyl-CoA carboxylase biotin-carrying subunit  64.75 
 
 
671 aa  845    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.928975  normal  0.0609126 
 
 
-
 
NC_007493  RSP_2191  propionyl-CoA carboxylase alpha subunit  65.53 
 
 
695 aa  840    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2043  carbamoyl-phosphate synthase L chain, ATP-binding  58.24 
 
 
682 aa  726    Acidovorax sp. JS42  Bacteria  normal  0.114869  normal 
 
 
-
 
NC_009620  Smed_4238  carbamoyl-phosphate synthase L chain ATP-binding  61.6 
 
 
670 aa  821    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2302  carbamoyl-phosphate synthase L chain, ATP-binding  65.33 
 
 
666 aa  844    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3181  Carbamoyl-phosphate synthase L chain ATP-binding  64.84 
 
 
667 aa  838    Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2515  acetyl-CoA carboxylase, biotin carboxylase  56.73 
 
 
682 aa  713    Acidovorax citrulli AAC00-1  Bacteria  normal  0.370768  normal  0.591821 
 
 
-
 
NC_009719  Plav_2772  carbamoyl-phosphate synthase L chain ATP-binding  66.47 
 
 
671 aa  867    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.187116 
 
 
-
 
NC_009505  BOV_1149  propionyl-CoA carboxylase, alpha subunit  65.48 
 
 
667 aa  871    Brucella ovis ATCC 25840  Bacteria  normal  0.12286  n/a   
 
 
-
 
NC_007643  Rru_A0052  biotin carboxylase  58.67 
 
 
662 aa  758    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2367  carbamoyl-phosphate synthase L chain, ATP-binding  65.09 
 
 
671 aa  838    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.60166 
 
 
-
 
NC_007794  Saro_0815  carbamoyl-phosphate synthase L chain, ATP-binding  57.1 
 
 
673 aa  733    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.450975  n/a   
 
 
-
 
NC_008786  Veis_3403  carbamoyl-phosphate synthase L chain, ATP-binding  55.75 
 
 
696 aa  697    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_0865  carbamoyl-phosphate synthase L chain, ATP-binding  65.38 
 
 
666 aa  840    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.246208  normal 
 
 
-
 
NC_007802  Jann_3370  carbamoyl-phosphate synthase L chain, ATP-binding  63.76 
 
 
680 aa  822    Jannaschia sp. CCS1  Bacteria  normal  0.447293  normal 
 
 
-
 
NC_007908  Rfer_2802  carbamoyl-phosphate synthase L chain, ATP-binding  56.69 
 
 
684 aa  704    Rhodoferax ferrireducens T118  Bacteria  normal  0.314171  n/a   
 
 
-
 
NC_010581  Bind_1318  carbamoyl-phosphate synthase L chain ATP-binding  60.82 
 
 
668 aa  790    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.185641  normal 
 
 
-
 
NC_007925  RPC_3352  carbamoyl-phosphate synthase L chain, ATP-binding  65.29 
 
 
671 aa  844    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.124303  normal 
 
 
-
 
NC_007948  Bpro_2167  carbamoyl-phosphate synthase L chain, ATP-binding  56.07 
 
 
682 aa  694    Polaromonas sp. JS666  Bacteria  normal  normal  0.283926 
 
 
-
 
NC_009952  Dshi_0723  carbamoyl-phosphate synthase L chain ATP-binding  63.03 
 
 
681 aa  827    Dinoroseobacter shibae DFL 12  Bacteria  normal  0.124518  normal 
 
 
-
 
NC_009511  Swit_2889  carbamoyl-phosphate synthase L chain, ATP-binding  59.32 
 
 
660 aa  733    Sphingomonas wittichii RW1  Bacteria  normal  0.894613  normal  0.421393 
 
 
-
 
NC_010002  Daci_3756  acetyl-CoA carboxylase, biotin carboxylase  56.22 
 
 
682 aa  714    Delftia acidovorans SPH-1  Bacteria  normal  0.0388867  normal  0.0417354 
 
 
-
 
NC_012850  Rleg_2077  Carbamoyl-phosphate synthase L chain ATP-binding  100 
 
 
673 aa  1365    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.776074 
 
 
-
 
NC_007958  RPD_3093  carbamoyl-phosphate synthase L chain, ATP-binding  65.98 
 
 
691 aa  822    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0379768 
 
 
-
 
NC_011666  Msil_3786  Carbamoyl-phosphate synthase L chain ATP-binding  63.76 
 
 
668 aa  817    Methylocella silvestris BL2  Bacteria  n/a    normal  0.34193 
 
 
-
 
NC_007964  Nham_2165  carbamoyl-phosphate synthase L chain, ATP-binding  63.92 
 
 
671 aa  820    Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1869  carbamoyl-phosphate synthase L chain, ATP-binding  62.97 
 
 
676 aa  828    Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1223  carbamoyl-phosphate synthase L chain, ATP-binding  58.33 
 
 
668 aa  726    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.116496  normal 
 
 
-
 
NC_010338  Caul_3000  carbamoyl-phosphate synthase L chain ATP-binding  59.35 
 
 
669 aa  788    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_0913  acetyl-CoA carboxylase, biotin carboxylase  57.31 
 
 
678 aa  729    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3221  Carbamoyl-phosphate synthase L chain ATP-binding  64.79 
 
 
667 aa  831    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.390977 
 
 
-
 
NC_008254  Meso_1020  carbamoyl-phosphate synthase L chain, ATP-binding  71.32 
 
 
670 aa  967    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3163  carbamoyl-phosphate synthase L chain ATP-binding  59.5 
 
 
669 aa  789    Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5683  acetyl-CoA carboxylase biotin carboxylase  63.85 
 
 
666 aa  831    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0385  carbamoyl-phosphate synthase L chain ATP-binding  65.49 
 
 
671 aa  854    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.519853 
 
 
-
 
NC_012791  Vapar_2131  acetyl-CoA carboxylase, biotin carboxylase  56.87 
 
 
682 aa  714    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1748  carbamoyl-phosphate synthase L chain, ATP-binding  55.21 
 
 
669 aa  681    Maricaulis maris MCS10  Bacteria  normal  normal  0.0501395 
 
 
-
 
NC_011992  Dtpsy_1853  Carbamoyl-phosphate synthase L chain ATP-binding  58.09 
 
 
682 aa  725    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007354  Ecaj_0539  carbamoyl-phosphate synthase subunit L  45.51 
 
 
656 aa  582  1.0000000000000001e-165  Ehrlichia canis str. Jake  Bacteria  normal  n/a   
 
 
-
 
NC_007799  ECH_0487  propionyl-CoA carboxylase, alpha subunit  46.76 
 
 
655 aa  582  1.0000000000000001e-165  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_002978  WD0433  propionyl-CoA carboxylase, alpha subunit  42.31 
 
 
691 aa  533  1e-150  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0751  Carbamoyl-phosphate synthase L chain ATP-binding  48.33 
 
 
667 aa  507  9.999999999999999e-143  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3292  3-methylcrotonoyl-CoA carboxylase, alpha subunit  46.71 
 
 
668 aa  506  9.999999999999999e-143  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2807  carbamoyl-phosphate synthase L chain, ATP-binding  43.5 
 
 
652 aa  499  1e-140  Marinobacter aquaeolei VT8  Bacteria  normal  0.167198  n/a   
 
 
-
 
NC_013730  Slin_3536  Carbamoyl-phosphate synthase L chain ATP- binding protein  54.89 
 
 
517 aa  499  1e-140  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1840  acetyl-CoA carboxylase biotin carboxylase subunit  55.61 
 
 
450 aa  494  9.999999999999999e-139  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0089  3-methylcrotonoyl-CoA carboxylase, alpha subunit  46.86 
 
 
666 aa  492  9.999999999999999e-139  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6229  Carbamoyl-phosphate synthase L chain ATP- binding  44.56 
 
 
643 aa  495  9.999999999999999e-139  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_30510  acetyl/propionyl-CoA carboxylase, alpha subunit  44.67 
 
 
665 aa  495  9.999999999999999e-139  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.434229 
 
 
-
 
NC_008740  Maqu_2125  carbamoyl-phosphate synthase L chain, ATP-binding  44.08 
 
 
662 aa  489  1e-137  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011694  PHATRDRAFT_51245  carboxylase propionyl-coa carboxylase  43.19 
 
 
664 aa  490  1e-137  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2441  acetyl-CoA carboxylase biotin carboxylase subunit  55.33 
 
 
450 aa  486  1e-136  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003295  RSc0265  acyl-CoA carboxylase subunit alpha  45.59 
 
 
712 aa  483  1e-135  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp1792  hypothetical protein  41.39 
 
 
654 aa  485  1e-135  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007908  Rfer_2815  carbamoyl-phosphate synthase L chain, ATP-binding  44.49 
 
 
654 aa  482  1e-135  Rhodoferax ferrireducens T118  Bacteria  normal  0.102576  n/a   
 
 
-
 
NC_014230  CA2559_11348  biotin carboxylase (accC)  55.9 
 
 
480 aa  484  1e-135  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0917166  n/a   
 
 
-
 
NC_006369  lpl1793  hypothetical protein  40.9 
 
 
654 aa  482  1e-134  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007347  Reut_A0151  3-methylcrotonoyl-CoA carboxylase, alpha subunit  45.64 
 
 
674 aa  480  1e-134  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0342  carbamoyl-phosphate synthase L chain, ATP-binding  42.49 
 
 
704 aa  481  1e-134  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1600  methylcrotonyl-CoA carboxylase, alpha subunit  53.56 
 
 
681 aa  477  1e-133  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_0311  3-methylcrotonoyl-CoA carboxylase, alpha subunit  43.06 
 
 
706 aa  478  1e-133  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3950  carbamoyl-phosphate synthase L chain, ATP-binding  40.76 
 
 
653 aa  476  1e-133  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.13606  normal 
 
 
-
 
NC_010682  Rpic_0116  Carbamoyl-phosphate synthase L chain ATP-binding  45.95 
 
 
674 aa  478  1e-133  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A3356  3-methylcrotonoyl-CoA carboxylase, alpha subunit  46.15 
 
 
672 aa  476  1e-133  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.782884 
 
 
-
 
NC_007955  Mbur_2426  pyruvate carboxylase subunit A  53.36 
 
 
498 aa  477  1e-133  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0123  Carbamoyl-phosphate synthase L chain ATP-binding  45.97 
 
 
674 aa  477  1e-133  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_26670  putative biotin carboxylase/biotin carboxyl carrier protein  43.9 
 
 
661 aa  477  1e-133  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.795664  normal 
 
 
-
 
NC_009727  CBUD_1070  methylcrotonyl-CoA carboxylase biotin-containing subunit  39.82 
 
 
661 aa  474  1e-132  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1463  3-methylcrotonoyl-CoA carboxylase, alpha subunit  46.05 
 
 
674 aa  473  1e-132  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_03803  biotin carboxylase  45.11 
 
 
675 aa  474  1e-132  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1855  carbamoyl-phosphate synthase L chain ATP-binding  45.73 
 
 
666 aa  473  1e-132  Xanthobacter autotrophicus Py2  Bacteria  normal  0.181486  normal 
 
 
-
 
NC_009524  PsycPRwf_2064  carbamoyl-phosphate synthase L chain, ATP-binding  42.74 
 
 
700 aa  473  1e-132  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0608  3-methylcrotonoyl-CoA carboxylase, subunit alpha  46 
 
 
679 aa  474  1e-132  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00695575  normal  0.371744 
 
 
-
 
NC_010117  COXBURSA331_A0962  biotin carboxylase  39.82 
 
 
661 aa  474  1e-132  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2263  putative biotin carboxylase/biotin carboxyl carrier protein  43.61 
 
 
661 aa  473  1e-132  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1527  Carbamoyl-phosphate synthase L chain ATP-binding  40.78 
 
 
685 aa  469  1.0000000000000001e-131  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2849  carbamoyl-phosphate synthase L chain ATP-binding  40.78 
 
 
686 aa  470  1.0000000000000001e-131  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0675  acetyl-CoA carboxylase, biotin carboxylase  55.33 
 
 
452 aa  469  1.0000000000000001e-131  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2831  carbamoyl-phosphate synthase L chain ATP-binding  41.07 
 
 
680 aa  470  1.0000000000000001e-131  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1359  3-methylcrotonyl-CoA carboxylase alpha subunit  43.17 
 
 
673 aa  471  1.0000000000000001e-131  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.812437 
 
 
-
 
NC_008322  Shewmr7_2397  3-methylcrotonoyl-CoA carboxylase, alpha subunit  41.48 
 
 
679 aa  469  1.0000000000000001e-131  Shewanella sp. MR-7  Bacteria  normal  0.63603  normal  0.616301 
 
 
-
 
NC_011138  MADE_02415  methylcrotonyl-CoA carboxylase, alpha subunit  41.05 
 
 
666 aa  469  1.0000000000000001e-131  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
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