178 homologs were found in PanDaTox collection
for query gene Rcas_3612 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_3612  extracellular solute-binding protein  100 
 
 
411 aa  785    Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.423524  normal 
 
 
-
 
NC_009523  RoseRS_3940  extracellular solute-binding protein  80.38 
 
 
439 aa  574  1.0000000000000001e-162  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3483  extracellular solute-binding protein family 1  37.9 
 
 
437 aa  184  3e-45  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20470  extracellular solute-binding protein family 1  24.75 
 
 
406 aa  119  7.999999999999999e-26  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000403753  n/a   
 
 
-
 
NC_013421  Pecwa_1321  extracellular solute-binding protein family 1  26.82 
 
 
410 aa  86.7  8e-16  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2958  extracellular solute-binding protein family 1  26.54 
 
 
410 aa  86.3  0.000000000000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.347864  n/a   
 
 
-
 
NC_008698  Tpen_1055  extracellular solute-binding protein  23.5 
 
 
418 aa  85.1  0.000000000000002  Thermofilum pendens Hrk 5  Archaea  normal  0.404897  n/a   
 
 
-
 
NC_009486  Tpet_1552  extracellular solute-binding protein  23.95 
 
 
391 aa  84.7  0.000000000000003  Thermotoga petrophila RKU-1  Bacteria  decreased coverage  0.000000398035  n/a   
 
 
-
 
NC_010483  TRQ2_1614  extracellular solute-binding protein  23.95 
 
 
391 aa  82.8  0.000000000000009  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.000159886  n/a   
 
 
-
 
NC_013411  GYMC61_1511  extracellular solute-binding protein family 1  23.78 
 
 
424 aa  82.4  0.00000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011831  Cagg_3183  extracellular solute-binding protein family 1  26.9 
 
 
411 aa  81.3  0.00000000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.641192  normal  0.908857 
 
 
-
 
NC_008698  Tpen_1453  extracellular solute-binding protein  25 
 
 
415 aa  80.1  0.00000000000006  Thermofilum pendens Hrk 5  Archaea  normal  0.0104666  n/a   
 
 
-
 
NC_013743  Htur_2649  extracellular solute-binding protein family 1  29.37 
 
 
400 aa  79.3  0.0000000000001  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011891  A2cp1_4289  extracellular solute-binding protein family 1  33.19 
 
 
400 aa  78.6  0.0000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.53848  n/a   
 
 
-
 
NC_011145  AnaeK_4267  extracellular solute-binding protein family 1  33.19 
 
 
400 aa  78.6  0.0000000000002  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4136  ABC sugar transporter, periplasmic ligand binding protein  32.77 
 
 
400 aa  76.6  0.0000000000007  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0984  extracellular solute-binding protein  23.14 
 
 
392 aa  74.7  0.000000000003  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.000118485  n/a   
 
 
-
 
NC_009486  Tpet_0966  extracellular solute-binding protein  22.88 
 
 
392 aa  73.6  0.000000000007  Thermotoga petrophila RKU-1  Bacteria  unclonable  0.0000000011003  n/a   
 
 
-
 
NC_012912  Dd1591_1276  extracellular solute-binding protein family 1  24.72 
 
 
417 aa  72.8  0.00000000001  Dickeya zeae Ech1591  Bacteria  decreased coverage  0.000485827  n/a   
 
 
-
 
NC_013595  Sros_3339  Maltose-binding periplasmic protein/domains- like protein  26.03 
 
 
431 aa  72.4  0.00000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.202326 
 
 
-
 
NC_013159  Svir_11620  ABC-type sugar transport system, periplasmic component  25.48 
 
 
426 aa  72  0.00000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  29.26 
 
 
415 aa  70.9  0.00000000004  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_16190  extracellular solute-binding protein family 1  22.84 
 
 
401 aa  70.9  0.00000000004  Halothermothrix orenii H 168  Bacteria  decreased coverage  0.00305219  n/a   
 
 
-
 
NC_010465  YPK_0968  extracellular solute-binding protein  23.93 
 
 
411 aa  70.1  0.00000000006  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.155665  n/a   
 
 
-
 
NC_010159  YpAngola_A3883  maltose/maltodextrin ABC transporter periplasmic maltose/maltodextrin-binding protein  23.93 
 
 
411 aa  69.7  0.00000000009  Yersinia pestis Angola  Bacteria  normal  normal  0.265603 
 
 
-
 
NC_011772  BCG9842_B1120  putative maltosaccharide ABC transporter, maltosaccharide-binding protein  22.44 
 
 
419 aa  68.9  0.0000000001  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000383609  normal 
 
 
-
 
NC_009708  YpsIP31758_0914  maltose/maltodextrin ABC transporter, periplasmic maltose/maltodextrin-binding protein  23.93 
 
 
411 aa  68.9  0.0000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.459005  n/a   
 
 
-
 
NC_013440  Hoch_5852  extracellular solute-binding protein family 1  29.1 
 
 
438 aa  68.2  0.0000000003  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_3841  extracellular solute-binding protein  23.36 
 
 
419 aa  67.4  0.0000000005  Bacillus weihenstephanensis KBAB4  Bacteria  decreased coverage  0.000013033  n/a   
 
 
-
 
NC_011658  BCAH187_A4138  putative maltosaccharide ABC transporter, maltosaccharide-binding protein  23.68 
 
 
419 aa  66.6  0.0000000008  Bacillus cereus AH187  Bacteria  hitchhiker  0.00348898  n/a   
 
 
-
 
NC_011661  Dtur_0854  extracellular solute-binding protein family 1  23.06 
 
 
398 aa  66.6  0.0000000008  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.124504  n/a   
 
 
-
 
NC_005945  BAS3922  maltosaccharide ABC transporter maltosaccharide-binding protein  23.36 
 
 
419 aa  66.2  0.000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.0134813  n/a   
 
 
-
 
NC_005957  BT9727_3754  maltose-maltodextrin ABC-related solute binding protein  23.36 
 
 
419 aa  66.2  0.000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00000542287  n/a   
 
 
-
 
NC_006274  BCZK3770  maltosaccharide ABC transporter, maltosaccharide-binding protein  23.36 
 
 
419 aa  66.2  0.000000001  Bacillus cereus E33L  Bacteria  hitchhiker  0.000087749  n/a   
 
 
-
 
NC_007530  GBAA_4229  maltosaccharide ABC transporter maltosaccharide-binding protein  23.36 
 
 
419 aa  66.2  0.000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.749727  n/a   
 
 
-
 
NC_011773  BCAH820_4032  putative maltosaccharide ABC transporter, maltosaccharide-binding protein  23.36 
 
 
419 aa  66.2  0.000000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A4119  putative maltosaccharide ABC transporter, maltosaccharide-binding protein  23.68 
 
 
419 aa  65.9  0.000000001  Bacillus cereus B4264  Bacteria  hitchhiker  0.000674051  n/a   
 
 
-
 
NC_011661  Dtur_0712  extracellular solute-binding protein family 1  20.87 
 
 
397 aa  65.1  0.000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.518168  n/a   
 
 
-
 
NC_003909  BCE_4064  maltosaccharide ABC transporter, maltosaccharide-binding protein, putative  23.36 
 
 
419 aa  64.3  0.000000004  Bacillus cereus ATCC 10987  Bacteria  normal  0.0421403  n/a   
 
 
-
 
NC_013530  Xcel_2152  extracellular solute-binding protein family 1  25.2 
 
 
415 aa  63.9  0.000000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.410183  n/a   
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  28.34 
 
 
411 aa  63.5  0.000000007  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_009674  Bcer98_2714  extracellular solute-binding protein  22.15 
 
 
419 aa  62.8  0.00000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.182746  n/a   
 
 
-
 
NC_012793  GWCH70_0701  extracellular solute-binding protein family 1  25.39 
 
 
432 aa  62.4  0.00000001  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2611  extracellular solute-binding protein family 1  27.67 
 
 
453 aa  61.6  0.00000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.058641  normal 
 
 
-
 
NC_013946  Mrub_2535  extracellular solute-binding protein family 1  26.79 
 
 
418 aa  62  0.00000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.105932  normal 
 
 
-
 
NC_012029  Hlac_0632  extracellular solute-binding protein family 1  25.59 
 
 
434 aa  61.6  0.00000003  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.708501  normal 
 
 
-
 
NC_012858  Rleg_6631  extracellular solute-binding protein family 1  30 
 
 
410 aa  61.2  0.00000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.325237 
 
 
-
 
NC_009718  Fnod_0781  extracellular solute-binding protein  22.44 
 
 
395 aa  61.6  0.00000003  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000729506  n/a   
 
 
-
 
NC_010001  Cphy_2308  extracellular solute-binding protein  24.89 
 
 
440 aa  61.2  0.00000003  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000000253431  n/a   
 
 
-
 
NC_010623  Bphy_4057  extracellular solute-binding protein  26.32 
 
 
410 aa  61.2  0.00000003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7208  extracellular solute-binding protein family 1  26.78 
 
 
410 aa  61.2  0.00000003  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1118  extracellular solute-binding protein family 1  29.03 
 
 
400 aa  60.5  0.00000005  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.0000000704817  normal 
 
 
-
 
NC_013739  Cwoe_3983  extracellular solute-binding protein family 1  27.5 
 
 
456 aa  60.5  0.00000005  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0420  ABC sugar transporter, periplasmic ligand binding protein  26.36 
 
 
410 aa  60.1  0.00000007  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2758  extracellular solute-binding protein family 1  31.05 
 
 
423 aa  60.1  0.00000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.736779  normal 
 
 
-
 
NC_014212  Mesil_1170  extracellular solute-binding protein family 1  26.45 
 
 
397 aa  59.7  0.00000009  Meiothermus silvanus DSM 9946  Bacteria  normal  0.441465  normal  0.43389 
 
 
-
 
NC_009616  Tmel_0596  extracellular solute-binding protein  23.74 
 
 
390 aa  58.9  0.0000002  Thermosipho melanesiensis BI429  Bacteria  decreased coverage  0.00439649  n/a   
 
 
-
 
NC_011988  Avi_6240  ABC transporter substrate binding protein (maltose)  28.11 
 
 
407 aa  58.2  0.0000002  Agrobacterium vitis S4  Bacteria  normal  0.0994607  n/a   
 
 
-
 
NC_011366  Rleg2_5687  extracellular solute-binding protein family 1  29.24 
 
 
401 aa  58.9  0.0000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.627079  normal 
 
 
-
 
NC_009667  Oant_2485  extracellular solute-binding protein  26.06 
 
 
415 aa  57.8  0.0000003  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00421769  n/a   
 
 
-
 
NC_013131  Caci_2108  extracellular solute-binding protein family 1  26.14 
 
 
430 aa  58.2  0.0000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.553068 
 
 
-
 
NC_008061  Bcen_5060  extracellular solute-binding protein  32.83 
 
 
421 aa  57  0.0000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.299118  n/a   
 
 
-
 
NC_008543  Bcen2424_5800  extracellular solute-binding protein  32.83 
 
 
421 aa  57  0.0000005  Burkholderia cenocepacia HI2424  Bacteria  normal  0.307701  normal 
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  25.72 
 
 
414 aa  57.4  0.0000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_009504  BOV_A0698  putative sugar ABC transporter, periplasmic sugar-binding protein  23.69 
 
 
366 aa  57  0.0000006  Brucella ovis ATCC 25840  Bacteria  normal  0.436581  n/a   
 
 
-
 
NC_009972  Haur_4563  extracellular solute-binding protein  25.22 
 
 
439 aa  56.6  0.0000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA1073  putative sugar ABC transporter, periplasmic sugar-binding protein  37.01 
 
 
399 aa  55.8  0.000001  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1619  putative sugar-binding lipoprotein  26.77 
 
 
434 aa  55.8  0.000001  Thermobifida fusca YX  Bacteria  normal  0.195944  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0230  putative transporter periplasmic binding protein  37.01 
 
 
426 aa  55.8  0.000001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_1151  extracellular solute-binding protein family 1  27.15 
 
 
400 aa  55.8  0.000001  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B3065  ABC sugar transporter, periplasmic ligand binding protein  32.32 
 
 
421 aa  55.8  0.000001  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1179  sugar ABC transporter, periplasmic sugar-binding protein, putative  31.5 
 
 
423 aa  55.8  0.000001  Burkholderia thailandensis E264  Bacteria  normal  0.0916647  n/a   
 
 
-
 
NC_008025  Dgeo_1500  extracellular solute-binding protein  27.37 
 
 
393 aa  56.2  0.000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008784  BMASAVP1_0065  putative sugar ABC transporter, periplasmic sugar-binding protein  37.01 
 
 
426 aa  55.8  0.000001  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0354  putative sugar ABC transporter, periplasmic sugar-binding protein  37.01 
 
 
426 aa  55.8  0.000001  Burkholderia mallei NCTC 10229  Bacteria  normal  0.824168  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1650  putative sugar ABC transporter, periplasmic sugar-binding protein  37.01 
 
 
426 aa  55.8  0.000001  Burkholderia pseudomallei 1106a  Bacteria  normal  0.572617  n/a   
 
 
-
 
NC_009079  BMA10247_A1232  putative sugar ABC transporter, periplasmic sugar-binding protein  37.01 
 
 
426 aa  55.8  0.000001  Burkholderia mallei NCTC 10247  Bacteria  normal  0.715088  n/a   
 
 
-
 
NC_010003  Pmob_1262  extracellular solute-binding protein  21.91 
 
 
408 aa  55.8  0.000001  Petrotoga mobilis SJ95  Bacteria  normal  0.953049  n/a   
 
 
-
 
NC_010515  Bcenmc03_4379  extracellular solute-binding protein  32.32 
 
 
421 aa  55.8  0.000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4984  extracellular solute-binding protein family 1  26.79 
 
 
428 aa  55.8  0.000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  23.69 
 
 
411 aa  55.5  0.000002  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_008010  Dgeo_2726  extracellular solute-binding protein  26.4 
 
 
437 aa  55.1  0.000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.290956  n/a   
 
 
-
 
NC_013131  Caci_2418  extracellular solute-binding protein family 1  25 
 
 
447 aa  55.5  0.000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A1739  ABC-type sugar transport system, periplasmic component  36.22 
 
 
426 aa  55.1  0.000002  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0910  extracellular solute-binding protein family 1  32.24 
 
 
466 aa  55.1  0.000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.764586  normal 
 
 
-
 
NC_009620  Smed_4644  extracellular solute-binding protein  30.23 
 
 
409 aa  54.7  0.000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.0265502  normal  0.0904039 
 
 
-
 
NC_009664  Krad_0385  extracellular solute-binding protein family 1  24.52 
 
 
410 aa  54.7  0.000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0390662 
 
 
-
 
NC_008262  CPR_0904  ABC transporter, periplasmic substrate-binding protein, putative  21.74 
 
 
439 aa  54.3  0.000004  Clostridium perfringens SM101  Bacteria  decreased coverage  0.00221898  n/a   
 
 
-
 
NC_013526  Tter_2574  extracellular solute-binding protein family 1  26.28 
 
 
453 aa  54.3  0.000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5667  extracellular solute-binding protein family 1  27.78 
 
 
410 aa  53.9  0.000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3132  maltose ABC transporter periplasmic protein  23.11 
 
 
395 aa  53.9  0.000005  Pseudomonas mendocina ymp  Bacteria  normal  0.0559599  normal  0.0111617 
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  24.04 
 
 
411 aa  53.9  0.000005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  27.24 
 
 
419 aa  53.5  0.000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_011988  Avi_5398  ABC transporter substrate binding protein (sugar)  28.3 
 
 
403 aa  53.1  0.000008  Agrobacterium vitis S4  Bacteria  normal  0.14652  n/a   
 
 
-
 
NC_009487  SaurJH9_0199  extracellular solute-binding protein  21.53 
 
 
423 aa  53.1  0.000009  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.136897  n/a   
 
 
-
 
NC_009632  SaurJH1_0205  extracellular solute-binding protein  21.53 
 
 
423 aa  53.1  0.000009  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3683  extracellular solute-binding protein  29.41 
 
 
432 aa  52.8  0.00001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0348  extracellular solute-binding protein family 1  26.74 
 
 
419 aa  52.8  0.00001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0397  extracellular solute-binding protein  28.49 
 
 
428 aa  52.8  0.00001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1099  extracellular solute-binding protein  30.13 
 
 
457 aa  52.8  0.00001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
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