Gene BTH_II1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1179 
Symbol 
ID3846767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp1377596 
End bp1378867 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content69% 
IMG OID637838482 
Productsugar ABC transporter, periplasmic sugar-binding protein, putative 
Protein accessionYP_439376 
Protein GI83717337 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0916647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTCC GATTCCTGTT GGCCGCCGGG CTCGCCGGCG CGTGCGTGCC GGCCGCGGCC 
GCGACGCAAG TCTGCAAGGT GCCGACGCTC AAGGTCCTCG CGCAGAAGAG CCTCGGCCTT
TCGGTGATGG AGAAATCGCT GCCCGACTAC GAGAAGACGA CCGGCACCCG AATCGAGATC
AGCTATTTCG GCGAGAACGA CCGCCGCGCG AAATCGCGTC TCGACGCGTC GACGGGCGCG
GGCTCGTATC AGGTCTATTA CGTCGACGAG GCGAACGTCG CCGAATTCGC GTCGGCCGGC
TGGATCACAC CGCTCCTCAA GTACTACCCG AAGGAATACG ACTACGACGA CTTCCTGCCG
GGCCGCCGCG CGGCCGCGAG CTACAAGGGC GTCGCGTACT TCGCGCCGCT CATCGGCGGC
GGCGATTTCC TGTTCTACCG GCGCGACCTC CTCGACGCCG CGCACATCCC GGTGCCGAAG
ACGGTCGACG AGCTCGTCGC CGCGATCAGG AAGCTGAACG CGCCGCCGAA GCTGTACGGC
TGGGTCGCGC GCGGCCAGCG CGGCTCGGGC ATGAACGTGT GGCGCTGGGC GCCGTTCATG
CTCGCGCAGG GCGGCGCATG GACCGACAAG AGCGGCCGGC CGGCCTTCAA CTCGCCCGCC
GCCGTGCAGG CGACCGAGCG CTACCGCGAT CTCTTCAAGT ACGCGCCGCC CGGCGCGGCG
ACCTACGACT GGAGCAACGC GCTCGAAGCG TTCCGCTCGG GCAAGGTCGC GTTCATGATC
GAATCGACGC CGTTCGCCGA CTGGATGGAG GACCCGTCGA AGTCGAGCGT CGCGGGCAAG
GTCGGCTACG TGCGGCCGCC CGCGCCGCTG CCGTCCGCCG CTTACGGGCA CGGGCTCGCG
ATCTCGTCGG TCGGCGCGAA GGACGACTGC ACGCGGCAGG CCGCGGGCCG CTTCATCGCG
TGGGCGACGA GCAAGGAGCA GGAGCAGGCG CGGCTGCGCA ACGGCGTGTT CAGCGACTAC
AACCGAGCGA GCACGATCGG CAGCGACTAC TTCAAGCAGC ACGTGAAGCC GCAGATCCTC
GCGGGCCTCG CCGACACGAA CCCGGTGACG AAGGTGACGA TCTGGGCGAC GCCGCAGTGG
CCCGACATCG GCGAGAACCT CGGCATCGCG CTCGAGGAGA TCTTCACCGG CACGCAAACC
GACGTGCGGG GCGCGCTCGA CGACGCGGTG CAATACGCGA AGGACGCGAT GGCGCACGGC
GCGCGCAAGT GA
 
Protein sequence
MRFRFLLAAG LAGACVPAAA ATQVCKVPTL KVLAQKSLGL SVMEKSLPDY EKTTGTRIEI 
SYFGENDRRA KSRLDASTGA GSYQVYYVDE ANVAEFASAG WITPLLKYYP KEYDYDDFLP
GRRAAASYKG VAYFAPLIGG GDFLFYRRDL LDAAHIPVPK TVDELVAAIR KLNAPPKLYG
WVARGQRGSG MNVWRWAPFM LAQGGAWTDK SGRPAFNSPA AVQATERYRD LFKYAPPGAA
TYDWSNALEA FRSGKVAFMI ESTPFADWME DPSKSSVAGK VGYVRPPAPL PSAAYGHGLA
ISSVGAKDDC TRQAAGRFIA WATSKEQEQA RLRNGVFSDY NRASTIGSDY FKQHVKPQIL
AGLADTNPVT KVTIWATPQW PDIGENLGIA LEEIFTGTQT DVRGALDDAV QYAKDAMAHG
ARK