| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1739 |
|---|
| Symbol | |
|---|
| ID | 4886243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 1685024 |
|---|
| End bp | 1686304 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640131677 |
|---|
| Product | ABC-type sugar transport system, periplasmic component |
|---|
| Protein accession | YP_001062734 |
|---|
| Protein GI | 126445207 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATACGA TACGATTGCT TGGCGCCGCC GCGCTCGTCG GCGCATGCGC GCCGCTCGCG
GCGGCGGCCG CGACGCCAGT CTGCAAGGTG CCGACGCTGA AGGTCCTCGC GCAGAAGAGC
CTCGGGCTCT CGGTGATGGA GAAATCGCTG CCCGACTACG AGAAGACGAG CGGCACCCGG
ATCGAGATCA ATTACTTCGG CGAGAACGAC CGCCGTGCGA AATCGCGTCT CGACGCGTCG
ACGGGCGCGG GCTCGTATCA GATCTACTAC GTCGACGAGG CGAACGTCGC CGAATTCGCA
TCGGCCGGCT GGATCGCGCC GCTCCTCAAG TACTACCCGA AGGAATACGA TTACGACGAC
TTCCTGCCGG GCCGCCGCGC GGTGGCGAGC TACAAGGGCG TCGCGTACTT CGCGCCGCTC
ATCGGCGGGG GCGATTTCCT GTTCTACCGG CGCGACCTCC TCGACGCCGC GCACCTGCCG
GTGCCGAAGA CGCTGGACGA ACTCGTCGCC GCGGTCCGCA AGCTGAACGC GCCGCCGAAG
CTGTACGGCT GGGTCGCGCG CGGCCAGCGC GGCTCGGGCA TGAACGTGTG GCGCTGGGCG
CCGTTCATGC TCGCGCAGGG CGGCGCATGG ACCGACCCGC ACGGCCAGCC GGCGTTCAAC
TCGCCCTCCG CGGTGCAGGC GACCGAGCGC TACCGCGATC TCTTCAAGTA CGCGCCGCCG
GGCGCCGCGA CCTACGACTG GAGCAACGCG CTCGAAGCGT TCCGCTCGGG CAAGGTCGCG
TTCATGATCG AATCGACGCC GTTCGCCGAC TGGATGGAGG ACCCATCCAA GTCGAGCGTC
GCGGGCAAGG TCGGCTACGC GAGGCCGCCC GCGCCGCTGC CGTCGGCCGC TTACGGGCAC
GGGCTCGCGA TCTCGTCGGT CGGCGCGAAG GACGACTGCG CGCGGCAGGC GGCGGGCCGC
TTCATCGCAT GGGCGACGAG CAAGGAGCAG GAGCAGGCGC GGCTGCGCAA CGGCGTGTTC
AGCGACTACA ACCGCACGAG CACGATCGGC AGCGACTACT TCAGGCAGCA CGTGAAGCCG
CAGATCCTCG CCGGCCTGAA CGATACGAAC CCGGTGACGA AGGCGACGAT CTGGGCGACG
CCGCAATGGC CCGATATCGG CGACAACCTC GGCGTCGCGC TCGAGGAAGT CTTCACCGGC
ACGCAGACCG ACGTGCGCGG CGCGCTCGAC GACGCGGCGC AGTACGCGAA GGACGCGATG
GCGCACGGCG CGCGCAAGTG A
|
|---|
| Protein sequence | MNTIRLLGAA ALVGACAPLA AAAATPVCKV PTLKVLAQKS LGLSVMEKSL PDYEKTSGTR
IEINYFGEND RRAKSRLDAS TGAGSYQIYY VDEANVAEFA SAGWIAPLLK YYPKEYDYDD
FLPGRRAVAS YKGVAYFAPL IGGGDFLFYR RDLLDAAHLP VPKTLDELVA AVRKLNAPPK
LYGWVARGQR GSGMNVWRWA PFMLAQGGAW TDPHGQPAFN SPSAVQATER YRDLFKYAPP
GAATYDWSNA LEAFRSGKVA FMIESTPFAD WMEDPSKSSV AGKVGYARPP APLPSAAYGH
GLAISSVGAK DDCARQAAGR FIAWATSKEQ EQARLRNGVF SDYNRTSTIG SDYFRQHVKP
QILAGLNDTN PVTKATIWAT PQWPDIGDNL GVALEEVFTG TQTDVRGALD DAAQYAKDAM
AHGARK
|
|---|
| |