More than 300 homologs were found in PanDaTox collection
for query gene Namu_0409 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013235  Namu_0409  two component transcriptional regulator, LuxR family  100 
 
 		 191 aa  385  1e-106  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  78.14 
 
 		 218 aa  298  4e-80  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal  1 
 
 
-
 
NC_013235  Namu_5079  two component transcriptional regulator, LuxR family  76.37 
 
 		 217 aa  286  1e-76  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.525358 
 
 
-
 
NC_014165  Tbis_3390  LuxR family two component transcriptional regulator  79.76 
 
 		 228 aa  279  1e-74  Thermobispora bispora DSM 43833  Bacteria  normal  0.269937  normal  1 
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  73.08 
 
 		 215 aa  269  1e-71  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  73.08 
 
 		 215 aa  269  1e-71  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  73.08 
 
 		 215 aa  269  1e-71  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  70.33 
 
 		 219 aa  262  3e-69  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.92254 
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  68.09 
 
 		 244 aa  259  1e-68  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_2941  two component transcriptional regulator, LuxR family  67.2 
 
 		 219 aa  249  1e-65  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.911135  n/a   
 
 
-
 
NC_013739  Cwoe_1233  two component transcriptional regulator, LuxR family  65.38 
 
 		 220 aa  240  7.999999999999999e-63  Conexibacter woesei DSM 14684  Bacteria  normal  0.681342  normal  0.792953 
 
 
-
 
NC_013235  Namu_2635  two component transcriptional regulator, LuxR family  67.21 
 
 		 217 aa  238  4e-62  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000528497  hitchhiker  0.00476816 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  51.1 
 
 		 213 aa  170  1e-41  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  42.86 
 
 		 218 aa  144  1e-33  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  41.11 
 
 		 219 aa  142  3e-33  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  40.31 
 
 		 223 aa  142  3e-33  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  42.93 
 
 		 212 aa  141  7e-33  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  39.25 
 
 		 229 aa  140  9.999999999999999e-33  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  37.91 
 
 		 217 aa  140  1.9999999999999998e-32  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  40 
 
 		 215 aa  139  3e-32  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  39.04 
 
 		 218 aa  138  3.9999999999999997e-32  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  39.66 
 
 		 220 aa  136  1e-31  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  39.78 
 
 		 234 aa  137  1e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  43.41 
 
 		 242 aa  136  2e-31  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  40.22 
 
 		 218 aa  136  2e-31  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  42.31 
 
 		 218 aa  135  3.0000000000000003e-31  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  42.31 
 
 		 218 aa  135  3.0000000000000003e-31  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  38.71 
 
 		 217 aa  135  4e-31  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  38.89 
 
 		 212 aa  135  4e-31  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  38.71 
 
 		 217 aa  135  4e-31  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  41.85 
 
 		 218 aa  135  5e-31  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  40.85 
 
 		 217 aa  134  6.0000000000000005e-31  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  39.46 
 
 		 223 aa  134  8e-31  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  38.89 
 
 		 218 aa  133  1.9999999999999998e-30  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  39.67 
 
 		 218 aa  133  1.9999999999999998e-30  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  39.67 
 
 		 250 aa  132  3e-30  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  38.17 
 
 		 253 aa  132  3.9999999999999996e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  39.25 
 
 		 213 aa  131  5e-30  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  34.74 
 
 		 218 aa  130  1.0000000000000001e-29  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  37.84 
 
 		 303 aa  130  1.0000000000000001e-29  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  39.33 
 
 		 216 aa  130  1.0000000000000001e-29  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  38.17 
 
 		 234 aa  130  1.0000000000000001e-29  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  39.13 
 
 		 238 aa  129  2.0000000000000002e-29  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  39.34 
 
 		 217 aa  129  3e-29  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  32.63 
 
 		 228 aa  128  6e-29  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  35.91 
 
 		 212 aa  127  9.000000000000001e-29  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  36.76 
 
 		 237 aa  127  1.0000000000000001e-28  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  40 
 
 		 208 aa  127  1.0000000000000001e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  35.91 
 
 		 209 aa  127  1.0000000000000001e-28  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  37.78 
 
 		 216 aa  127  1.0000000000000001e-28  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  38.89 
 
 		 206 aa  126  2.0000000000000002e-28  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_010338  Caul_2685  two component LuxR family transcriptional regulator  39.15 
 
 		 222 aa  125  3e-28  Caulobacter sp. K31  Bacteria  normal  0.120511  normal  1 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  36.96 
 
 		 241 aa  125  4.0000000000000003e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  38.25 
 
 		 231 aa  125  4.0000000000000003e-28  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  37.16 
 
 		 213 aa  125  4.0000000000000003e-28  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  34.25 
 
 		 224 aa  125  5e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  38.66 
 
 		 226 aa  125  5e-28  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  40.66 
 
 		 216 aa  125  5e-28  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  38.83 
 
 		 225 aa  124  6e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  39.01 
 
 		 213 aa  124  6e-28  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  40.66 
 
 		 216 aa  124  6e-28  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  38.59 
 
 		 241 aa  124  6e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_010571  Oter_3186  two component LuxR family transcriptional regulator  37.91 
 
 		 215 aa  124  7e-28  Opitutus terrae PB90-1  Bacteria  normal  0.0678517  normal  1 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  41.58 
 
 		 221 aa  124  7e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  36.22 
 
 		 237 aa  124  9e-28  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  34.25 
 
 		 216 aa  123  1e-27  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_2782  two component LuxR family transcriptional regulator  38.12 
 
 		 214 aa  124  1e-27  Geobacter uraniireducens Rf4  Bacteria  normal  0.834695  n/a   
 
 
-
 
NC_007974  Rmet_4715  Two component LuxR family transcriptional regulator  37.84 
 
 		 264 aa  123  2e-27  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  37.7 
 
 		 214 aa  123  2e-27  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  39.78 
 
 		 224 aa  123  2e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  36.84 
 
 		 225 aa  123  2e-27  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  34.97 
 
 		 232 aa  122  2e-27  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  35.52 
 
 		 232 aa  122  3e-27  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  36.84 
 
 		 241 aa  122  3e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  38.66 
 
 		 229 aa  122  3e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  39.89 
 
 		 218 aa  122  4e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  38.92 
 
 		 239 aa  122  4e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011769  DvMF_1021  two component transcriptional regulator, LuxR family  37.43 
 
 		 216 aa  122  4e-27  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.794365 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  36.46 
 
 		 218 aa  121  5e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_2437  two component transcriptional regulator, LuxR family  40.33 
 
 		 218 aa  121  6e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  41.11 
 
 		 226 aa  121  6e-27  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  37.04 
 
 		 225 aa  121  7e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  36.67 
 
 		 226 aa  121  8e-27  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  36.51 
 
 		 224 aa  120  9e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  42.94 
 
 		 221 aa  120  9.999999999999999e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  34.25 
 
 		 217 aa  120  9.999999999999999e-27  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  35.52 
 
 		 228 aa  120  9.999999999999999e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  34.97 
 
 		 232 aa  120  9.999999999999999e-27  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_009439  Pmen_1563  two component LuxR family transcriptional regulator  37.1 
 
 		 214 aa  120  9.999999999999999e-27  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.241819 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  38.33 
 
 		 216 aa  119  1.9999999999999998e-26  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  34.81 
 
 		 213 aa  120  1.9999999999999998e-26  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  36.96 
 
 		 217 aa  120  1.9999999999999998e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  36.42 
 
 		 222 aa  119  1.9999999999999998e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal  1 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  37.43 
 
 		 214 aa  119  1.9999999999999998e-26  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  35.2 
 
 		 206 aa  119  3e-26  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  35 
 
 		 224 aa  119  3e-26  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010644  Emin_0306  two component LuxR family transcriptional regulator  35.2 
 
 		 215 aa  119  3e-26  Elusimicrobium minutum Pei191  Bacteria  unclonable  0.000000000161342  hitchhiker  0.00000159266 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  32.42 
 
 		 215 aa  119  3e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_3359  two component transcriptional regulator, LuxR family  39.44 
 
 		 219 aa  119  3e-26  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00321115  hitchhiker  0.000132937 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  32.97 
 
 		 215 aa  119  3.9999999999999996e-26  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
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