More than 300 homologs were found in PanDaTox collection
for query gene Dfer_2055 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013037  Dfer_2055  two component transcriptional regulator, LuxR family  100 
 
 		 220 aa  447  1e-125  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_5409  two component transcriptional regulator, LuxR family  57.27 
 
 		 223 aa  257  1e-67  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00220575  normal  1 
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  40.72 
 
 		 218 aa  174  9e-43  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_008255  CHU_1317  response regulator  38.71 
 
 		 220 aa  170  1e-41  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  39.17 
 
 		 215 aa  164  6.9999999999999995e-40  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  35.45 
 
 		 216 aa  157  1e-37  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  35.91 
 
 		 216 aa  157  2e-37  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  37.16 
 
 		 214 aa  155  3e-37  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  38.68 
 
 		 219 aa  154  7e-37  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  36.24 
 
 		 215 aa  154  1e-36  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  34.56 
 
 		 218 aa  154  1e-36  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  33.8 
 
 		 223 aa  153  2e-36  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  36.16 
 
 		 215 aa  153  2e-36  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  36.16 
 
 		 215 aa  153  2e-36  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  36.16 
 
 		 215 aa  153  2e-36  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  33.64 
 
 		 216 aa  152  5e-36  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  37.73 
 
 		 226 aa  152  5e-36  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  37.44 
 
 		 211 aa  151  1e-35  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_0670  two component LuxR family transcriptional regulator  35.91 
 
 		 216 aa  148  7e-35  Desulfovibrio vulgaris DP4  Bacteria  normal  0.267154  normal  1 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  33.03 
 
 		 224 aa  147  1.0000000000000001e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  36.49 
 
 		 244 aa  147  1.0000000000000001e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  33.64 
 
 		 223 aa  146  2.0000000000000003e-34  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  36.07 
 
 		 215 aa  147  2.0000000000000003e-34  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  35.16 
 
 		 217 aa  147  2.0000000000000003e-34  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_008255  CHU_1266  two-component response regulator  37.38 
 
 		 227 aa  145  4.0000000000000006e-34  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.847879  normal  0.913346 
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  35.91 
 
 		 218 aa  145  5e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal  1 
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  36.92 
 
 		 226 aa  143  2e-33  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  34.56 
 
 		 206 aa  143  2e-33  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  38.36 
 
 		 207 aa  143  2e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  33.94 
 
 		 216 aa  142  3e-33  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  33.33 
 
 		 219 aa  142  3e-33  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  34.86 
 
 		 232 aa  142  4e-33  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  34.4 
 
 		 218 aa  142  4e-33  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  34.4 
 
 		 232 aa  142  5e-33  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  35.02 
 
 		 219 aa  142  5e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.92254 
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  38.99 
 
 		 215 aa  142  6e-33  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  37.26 
 
 		 219 aa  141  7e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  36.15 
 
 		 222 aa  141  7e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal  1 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  32.11 
 
 		 228 aa  140  9.999999999999999e-33  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  34.4 
 
 		 213 aa  140  9.999999999999999e-33  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  31.34 
 
 		 229 aa  140  1.9999999999999998e-32  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  32.73 
 
 		 219 aa  140  1.9999999999999998e-32  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  34.86 
 
 		 218 aa  140  1.9999999999999998e-32  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  31.53 
 
 		 225 aa  140  1.9999999999999998e-32  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  35.45 
 
 		 215 aa  139  3e-32  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  34.7 
 
 		 216 aa  139  3e-32  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  34.25 
 
 		 216 aa  139  3.9999999999999997e-32  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1971  two component transcriptional regulator, LuxR family  34.09 
 
 		 216 aa  139  3.9999999999999997e-32  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008825  Mpe_A3494  two component LuxR family transcriptional regulator  34.98 
 
 		 226 aa  139  3.9999999999999997e-32  Methylibium petroleiphilum PM1  Bacteria  normal  0.514045  normal  1 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  33.94 
 
 		 232 aa  139  4.999999999999999e-32  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  32.73 
 
 		 219 aa  139  4.999999999999999e-32  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  32.57 
 
 		 217 aa  138  4.999999999999999e-32  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  37.5 
 
 		 218 aa  138  6e-32  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_007519  Dde_2674  two component LuxR family transcriptional regulator  34.55 
 
 		 215 aa  138  6e-32  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.721789  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  34.09 
 
 		 215 aa  138  7e-32  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  34.4 
 
 		 213 aa  138  7.999999999999999e-32  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  34.72 
 
 		 223 aa  138  7.999999999999999e-32  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
NC_009439  Pmen_1563  two component LuxR family transcriptional regulator  33.64 
 
 		 214 aa  137  8.999999999999999e-32  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.241819 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  32.57 
 
 		 218 aa  137  1e-31  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  33.03 
 
 		 219 aa  137  1e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  32.57 
 
 		 218 aa  137  1e-31  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  33.03 
 
 		 224 aa  137  1e-31  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  32.57 
 
 		 224 aa  137  2e-31  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  35.94 
 
 		 215 aa  136  2e-31  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  32.42 
 
 		 222 aa  136  2e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  33.19 
 
 		 226 aa  137  2e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  34.25 
 
 		 214 aa  137  2e-31  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  35.38 
 
 		 232 aa  136  3.0000000000000003e-31  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  31.36 
 
 		 219 aa  136  3.0000000000000003e-31  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.869411 
 
 
-
 
NC_013757  Gobs_2941  two component transcriptional regulator, LuxR family  32.42 
 
 		 219 aa  136  3.0000000000000003e-31  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.911135  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  32.88 
 
 		 216 aa  135  4e-31  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  35.62 
 
 		 212 aa  135  4e-31  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_007298  Daro_1572  two component LuxR family transcriptional regulator  35.78 
 
 		 218 aa  135  4e-31  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.972408 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  33.79 
 
 		 253 aa  135  4e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  33.94 
 
 		 221 aa  135  5e-31  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013235  Namu_5079  two component transcriptional regulator, LuxR family  32.43 
 
 		 217 aa  135  5e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.525358 
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  35.85 
 
 		 232 aa  135  5e-31  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  35.38 
 
 		 232 aa  135  6.0000000000000005e-31  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  32.57 
 
 		 218 aa  135  6.0000000000000005e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  35.02 
 
 		 213 aa  135  6.0000000000000005e-31  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  35.48 
 
 		 215 aa  135  7.000000000000001e-31  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  35.48 
 
 		 215 aa  135  7.000000000000001e-31  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_3299  LuxR response regulator receiver  31.36 
 
 		 220 aa  135  7.000000000000001e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0158345  normal  1 
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  35.48 
 
 		 215 aa  135  7.000000000000001e-31  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  35.48 
 
 		 215 aa  135  7.000000000000001e-31  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  31.51 
 
 		 214 aa  135  7.000000000000001e-31  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  35.48 
 
 		 215 aa  135  7.000000000000001e-31  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010681  Bphyt_2656  two component transcriptional regulator, LuxR family  34.86 
 
 		 210 aa  134  8e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  0.756738  normal  0.520546 
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  34.56 
 
 		 215 aa  134  8e-31  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  32.56 
 
 		 213 aa  134  8e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  32.41 
 
 		 222 aa  134  8e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  32.11 
 
 		 224 aa  134  9e-31  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  32.11 
 
 		 224 aa  134  9e-31  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_1400  two component LuxR family transcriptional regulator  31.34 
 
 		 216 aa  134  9e-31  Dechloromonas aromatica RCB  Bacteria  normal  0.973321  normal  0.0605156 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  35.62 
 
 		 209 aa  134  9e-31  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  34.26 
 
 		 221 aa  134  9e-31  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  31.28 
 
 		 208 aa  134  9e-31  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_3390  LuxR family two component transcriptional regulator  36.36 
 
 		 228 aa  134  9e-31  Thermobispora bispora DSM 43833  Bacteria  normal  0.269937  normal  1 
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  32.58 
 
 		 215 aa  134  9.999999999999999e-31  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  32.86 
 
 		 216 aa  133  1.9999999999999998e-30  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
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