More than 300 homologs were found in PanDaTox collection
for query gene CHU_1266 on replicon NC_008255
Organism: Cytophaga hutchinsonii ATCC 33406



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008255  CHU_1266  two-component response regulator  100 
 
 		 227 aa  456  1e-127  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.847879  normal  0.913346 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  39.71 
 
 		 218 aa  164  8e-40  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_1317  response regulator  40.85 
 
 		 220 aa  164  8e-40  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  37.67 
 
 		 219 aa  159  3e-38  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  38.76 
 
 		 216 aa  155  7e-37  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_5409  two component transcriptional regulator, LuxR family  36.57 
 
 		 223 aa  154  9e-37  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00220575  normal  1 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  37.44 
 
 		 228 aa  154  2e-36  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  35.98 
 
 		 213 aa  153  2.9999999999999998e-36  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  38.76 
 
 		 216 aa  153  2.9999999999999998e-36  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_013037  Dfer_2055  two component transcriptional regulator, LuxR family  37.38 
 
 		 220 aa  152  2.9999999999999998e-36  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  39.81 
 
 		 210 aa  152  4e-36  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  38.28 
 
 		 216 aa  152  5e-36  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  38.28 
 
 		 215 aa  152  5.9999999999999996e-36  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  35.21 
 
 		 215 aa  151  5.9999999999999996e-36  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  39.32 
 
 		 210 aa  151  8e-36  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  35.55 
 
 		 212 aa  151  8.999999999999999e-36  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  35.38 
 
 		 218 aa  151  8.999999999999999e-36  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  37.25 
 
 		 216 aa  151  8.999999999999999e-36  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  39.32 
 
 		 210 aa  150  2e-35  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  36.67 
 
 		 215 aa  149  5e-35  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_0905  putative nitrate/nitrite DNA-binding response regulator  37.32 
 
 		 206 aa  148  6e-35  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0826046  hitchhiker  0.00000533581 
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  35.48 
 
 		 223 aa  148  7e-35  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  40 
 
 		 224 aa  147  1.0000000000000001e-34  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  35.19 
 
 		 217 aa  147  1.0000000000000001e-34  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_1400  two component LuxR family transcriptional regulator  34.12 
 
 		 216 aa  146  2.0000000000000003e-34  Dechloromonas aromatica RCB  Bacteria  normal  0.973321  normal  0.0605156 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  35.96 
 
 		 217 aa  147  2.0000000000000003e-34  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  34.45 
 
 		 232 aa  145  4.0000000000000006e-34  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  38.39 
 
 		 224 aa  145  4.0000000000000006e-34  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_008009  Acid345_0972  two component LuxR family transcriptional regulator  38.39 
 
 		 227 aa  145  6e-34  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.299836  normal  0.0302219 
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  36.95 
 
 		 206 aa  145  7.0000000000000006e-34  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_5126  two component LuxR family transcriptional regulator  34.74 
 
 		 209 aa  144  8.000000000000001e-34  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.135043  normal  0.384971 
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  34.45 
 
 		 232 aa  144  8.000000000000001e-34  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  37.8 
 
 		 216 aa  144  9e-34  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  37.44 
 
 		 212 aa  144  9e-34  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  39.53 
 
 		 224 aa  144  1e-33  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  39.53 
 
 		 224 aa  144  1e-33  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  33.64 
 
 		 229 aa  144  1e-33  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  36.59 
 
 		 223 aa  144  1e-33  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  37.31 
 
 		 210 aa  144  1e-33  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  32.86 
 
 		 217 aa  143  2e-33  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  34.8 
 
 		 212 aa  143  2e-33  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  34.98 
 
 		 216 aa  143  2e-33  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  33.49 
 
 		 206 aa  143  2e-33  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  35.35 
 
 		 213 aa  143  2e-33  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  36.15 
 
 		 218 aa  142  3e-33  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  35.61 
 
 		 226 aa  142  3e-33  Conexibacter woesei DSM 14684  Bacteria  normal  1  hitchhiker  0.00432991 
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  36.32 
 
 		 210 aa  142  4e-33  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  37.8 
 
 		 232 aa  142  4e-33  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  37.8 
 
 		 232 aa  142  5e-33  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  36.19 
 
 		 218 aa  142  5e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal  1 
 
 
-
 
NC_007951  Bxe_A1460  two component LuxR family transcriptional regulator  36.95 
 
 		 210 aa  142  5e-33  Burkholderia xenovorans LB400  Bacteria  normal  0.39219  normal  0.352919 
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  34.09 
 
 		 214 aa  142  6e-33  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  35.92 
 
 		 236 aa  142  6e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  34.76 
 
 		 218 aa  141  7e-33  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  37.32 
 
 		 232 aa  141  7e-33  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  34.78 
 
 		 207 aa  141  7e-33  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  33.18 
 
 		 224 aa  141  9e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  35.07 
 
 		 223 aa  140  9.999999999999999e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.172592 
 
 
-
 
NC_009439  Pmen_4183  two component LuxR family transcriptional regulator  32.85 
 
 		 220 aa  141  9.999999999999999e-33  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  34.8 
 
 		 239 aa  140  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  36.84 
 
 		 226 aa  140  1.9999999999999998e-32  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_007005  Psyr_4618  LuxR response regulator receiver  34.74 
 
 		 209 aa  140  1.9999999999999998e-32  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.601025 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  36.92 
 
 		 218 aa  140  1.9999999999999998e-32  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  33.97 
 
 		 232 aa  140  1.9999999999999998e-32  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  34.15 
 
 		 222 aa  140  1.9999999999999998e-32  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  34.98 
 
 		 213 aa  140  1.9999999999999998e-32  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  35.27 
 
 		 226 aa  140  1.9999999999999998e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  34.74 
 
 		 215 aa  140  1.9999999999999998e-32  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  35.21 
 
 		 218 aa  140  1.9999999999999998e-32  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  35.21 
 
 		 218 aa  140  1.9999999999999998e-32  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  34.62 
 
 		 218 aa  139  3e-32  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  35.89 
 
 		 214 aa  139  3e-32  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  30.84 
 
 		 219 aa  139  3.9999999999999997e-32  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_010681  Bphyt_2656  two component transcriptional regulator, LuxR family  34.98 
 
 		 210 aa  139  4.999999999999999e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  0.756738  normal  0.520546 
 
 
-
 
NC_009092  Shew_1824  response regulator  33.18 
 
 		 229 aa  139  4.999999999999999e-32  Shewanella loihica PV-4  Bacteria  normal  0.152948  normal  1 
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  34.76 
 
 		 215 aa  138  6e-32  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  36.45 
 
 		 215 aa  138  6e-32  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  36.45 
 
 		 215 aa  138  6e-32  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  36.45 
 
 		 215 aa  138  6e-32  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_07840  putative two-component response regulator  33.97 
 
 		 210 aa  138  7e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.0171986 
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  32.06 
 
 		 220 aa  138  7.999999999999999e-32  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  34.48 
 
 		 213 aa  138  7.999999999999999e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.0500394 
 
 
-
 
NC_009656  PSPA7_0745  putative two-component response regulator  34.45 
 
 		 210 aa  138  8.999999999999999e-32  Pseudomonas aeruginosa PA7  Bacteria  normal  0.536324  n/a   
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  32.72 
 
 		 244 aa  138  8.999999999999999e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  33.96 
 
 		 208 aa  138  8.999999999999999e-32  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_013440  Hoch_1846  two component transcriptional regulator, LuxR family  35.96 
 
 		 212 aa  138  8.999999999999999e-32  Haliangium ochraceum DSM 14365  Bacteria  normal  0.349565  normal  0.2019 
 
 
-
 
NC_009483  Gura_2782  two component LuxR family transcriptional regulator  34.3 
 
 		 214 aa  137  1e-31  Geobacter uraniireducens Rf4  Bacteria  normal  0.834695  n/a   
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  33.66 
 
 		 212 aa  137  1e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  33.17 
 
 		 225 aa  137  1e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  33.01 
 
 		 224 aa  137  1e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  33.97 
 
 		 216 aa  137  1e-31  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  33.99 
 
 		 210 aa  137  1e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_004578  PSPTO_0560  DNA-binding response regulator, LuxR family  35.19 
 
 		 209 aa  137  2e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  34.29 
 
 		 226 aa  137  2e-31  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal  1 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  30.84 
 
 		 230 aa  137  2e-31  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_0938  two component LuxR family transcriptional regulator  33.81 
 
 		 242 aa  137  2e-31  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  35.78 
 
 		 213 aa  136  2e-31  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  36.02 
 
 		 221 aa  137  2e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal  1 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  34.88 
 
 		 228 aa  136  2e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.92 
 
 		 222 aa  137  2e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal  1 
 
 
-
 
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