More than 300 homologs were found in PanDaTox collection
for query gene Daci_3084 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_3084  methyl-accepting chemotaxis sensory transducer  100 
 
 
719 aa  1460    Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3136  putative methyl-accepting chemotaxis transmembrane protein  41.1 
 
 
661 aa  457  1e-127  Ralstonia solanacearum GMI1000  Bacteria  normal  0.598743  normal 
 
 
-
 
NC_012856  Rpic12D_3066  methyl-accepting chemotaxis sensory transducer  40.95 
 
 
662 aa  455  1.0000000000000001e-126  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6894  methyl-accepting chemotaxis sensory transducer  40.63 
 
 
657 aa  450  1e-125  Burkholderia phytofirmans PsJN  Bacteria  normal  0.068141  normal  0.373533 
 
 
-
 
NC_010682  Rpic_3412  methyl-accepting chemotaxis sensory transducer  40.8 
 
 
662 aa  452  1e-125  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4315  methyl-accepting chemotaxis sensory transducer  41.34 
 
 
656 aa  439  9.999999999999999e-123  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2939  methyl-accepting chemotaxis sensory transducer  41.08 
 
 
672 aa  441  9.999999999999999e-123  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4309  methyl-accepting chemotaxis sensory transducer  40.21 
 
 
659 aa  428  1e-118  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.226298 
 
 
-
 
NC_007650  BTH_II1684  methyl-accepting chemotaxis protein I  40.18 
 
 
676 aa  423  1e-117  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1080  methyl-accepting chemotaxis protein  39.83 
 
 
687 aa  421  1e-116  Burkholderia pseudomallei 668  Bacteria  normal  0.469209  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0994  methyl-accepting chemotaxis protein  40.35 
 
 
678 aa  414  1e-114  Burkholderia pseudomallei 1106a  Bacteria  normal  0.799426  n/a   
 
 
-
 
NC_008061  Bcen_4070  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
660 aa  413  1e-114  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4296  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
660 aa  413  1e-114  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A2308  methyl-accepting chemotaxis protein II  40 
 
 
684 aa  410  1e-113  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_3221  methyl-accepting chemotaxis sensory transducer  40.83 
 
 
660 aa  410  1e-113  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.229974 
 
 
-
 
NC_008391  Bamb_3714  methyl-accepting chemotaxis sensory transducer  40.52 
 
 
660 aa  407  1.0000000000000001e-112  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4192  methyl-accepting chemotaxis sensory transducer  40.52 
 
 
660 aa  406  1.0000000000000001e-112  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0520721  normal  0.510764 
 
 
-
 
NC_008835  BMA10229_0140  putative methyl-accepting chemotaxis protein  39.85 
 
 
684 aa  391  1e-107  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0610174  n/a   
 
 
-
 
NC_012912  Dd1591_0772  methyl-accepting chemotaxis sensory transducer  36.1 
 
 
646 aa  389  1e-106  Dickeya zeae Ech1591  Bacteria  hitchhiker  0.00540264  n/a   
 
 
-
 
NC_013421  Pecwa_3594  methyl-accepting chemotaxis sensory transducer  35.93 
 
 
646 aa  382  1e-105  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3437  methyl-accepting chemotaxis sensory transducer  35.63 
 
 
646 aa  385  1e-105  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.143807  n/a   
 
 
-
 
NC_011992  Dtpsy_3481  methyl-accepting chemotaxis sensory transducer  39.26 
 
 
674 aa  384  1e-105  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4123  methyl-accepting chemotaxis sensory transducer  39.1 
 
 
674 aa  380  1e-104  Acidovorax sp. JS42  Bacteria  normal  0.162807  normal  0.87643 
 
 
-
 
NC_009436  Ent638_0366  methyl-accepting chemotaxis sensory transducer  36.32 
 
 
643 aa  377  1e-103  Enterobacter sp. 638  Bacteria  normal  normal  0.0151066 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  42.98 
 
 
680 aa  379  1e-103  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_012880  Dd703_0792  methyl-accepting chemotaxis sensory transducer  35.85 
 
 
651 aa  371  1e-101  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  56.07 
 
 
527 aa  345  2e-93  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  53.81 
 
 
586 aa  343  5e-93  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  51.79 
 
 
583 aa  341  4e-92  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  51.68 
 
 
542 aa  338  1.9999999999999998e-91  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  54.1 
 
 
578 aa  331  2e-89  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  55.79 
 
 
537 aa  332  2e-89  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  41.94 
 
 
585 aa  329  1.0000000000000001e-88  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  51.79 
 
 
598 aa  328  2.0000000000000001e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  53.15 
 
 
535 aa  328  3e-88  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  44.61 
 
 
584 aa  327  4.0000000000000003e-88  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  51.16 
 
 
589 aa  326  1e-87  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.77 
 
 
584 aa  326  1e-87  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  44.52 
 
 
515 aa  325  2e-87  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  53.6 
 
 
554 aa  323  5e-87  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  59.34 
 
 
659 aa  323  6e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  58.26 
 
 
580 aa  323  8e-87  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008784  BMASAVP1_0507  methyl-accepting chemotaxis protein  36.98 
 
 
630 aa  323  9.999999999999999e-87  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  42.94 
 
 
587 aa  321  3e-86  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  49.48 
 
 
596 aa  320  7.999999999999999e-86  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  58.82 
 
 
471 aa  318  2e-85  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  53.33 
 
 
589 aa  317  6e-85  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  47.71 
 
 
553 aa  316  9.999999999999999e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  55.88 
 
 
537 aa  316  9.999999999999999e-85  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  54.66 
 
 
557 aa  315  2.9999999999999996e-84  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  56.31 
 
 
653 aa  314  3.9999999999999997e-84  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  56.31 
 
 
653 aa  314  3.9999999999999997e-84  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  56.27 
 
 
536 aa  314  3.9999999999999997e-84  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.71 
 
 
566 aa  313  6.999999999999999e-84  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  57.61 
 
 
532 aa  312  1e-83  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  51.69 
 
 
559 aa  312  2e-83  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  51.79 
 
 
592 aa  311  2.9999999999999997e-83  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  48.89 
 
 
579 aa  311  2.9999999999999997e-83  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  55.99 
 
 
642 aa  311  4e-83  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  51.59 
 
 
595 aa  310  9e-83  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_010557  BamMC406_6172  methyl-accepting chemotaxis sensory transducer  43.69 
 
 
542 aa  309  1.0000000000000001e-82  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  44.27 
 
 
541 aa  308  2.0000000000000002e-82  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  55.16 
 
 
552 aa  308  3e-82  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1343  methyl-accepting chemotaxis sensory transducer  58.82 
 
 
620 aa  308  3e-82  Acidovorax citrulli AAC00-1  Bacteria  normal  0.244601  normal  0.213177 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  52.41 
 
 
532 aa  307  4.0000000000000004e-82  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  42.29 
 
 
585 aa  306  1.0000000000000001e-81  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  53.61 
 
 
589 aa  305  2.0000000000000002e-81  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  42.41 
 
 
519 aa  305  2.0000000000000002e-81  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  47.41 
 
 
602 aa  304  5.000000000000001e-81  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.39 
 
 
579 aa  303  9e-81  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  44.52 
 
 
589 aa  303  1e-80  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  46.12 
 
 
661 aa  301  2e-80  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  50.93 
 
 
650 aa  301  2e-80  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  54.07 
 
 
548 aa  302  2e-80  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  48.3 
 
 
579 aa  301  3e-80  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  47.81 
 
 
569 aa  301  3e-80  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  39.86 
 
 
621 aa  300  4e-80  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  41.65 
 
 
598 aa  300  6e-80  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  51.34 
 
 
543 aa  300  7e-80  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  49.58 
 
 
549 aa  299  1e-79  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.52 
 
 
598 aa  298  3e-79  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  54.14 
 
 
578 aa  297  4e-79  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  50.43 
 
 
591 aa  296  7e-79  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
519 aa  296  7e-79  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  58.97 
 
 
614 aa  296  8e-79  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  52.44 
 
 
622 aa  296  1e-78  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3430  methyl-accepting chemotaxis sensory transducer  49.1 
 
 
584 aa  295  2e-78  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  45.34 
 
 
567 aa  295  2e-78  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  48.35 
 
 
755 aa  294  3e-78  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  42.83 
 
 
519 aa  295  3e-78  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  53.44 
 
 
508 aa  294  3e-78  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  49.72 
 
 
584 aa  294  4e-78  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0740  methyl-accepting chemotaxis sensory transducer  49.71 
 
 
565 aa  293  6e-78  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  51.75 
 
 
511 aa  293  7e-78  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  50.87 
 
 
581 aa  293  7e-78  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  50.87 
 
 
579 aa  293  8e-78  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2363  methyl-accepting chemotaxis sensory transducer  53.67 
 
 
512 aa  293  8e-78  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  48.62 
 
 
573 aa  292  1e-77  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_010002  Daci_5410  methyl-accepting chemotaxis sensory transducer  48.73 
 
 
635 aa  293  1e-77  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.63 
 
 
564 aa  292  2e-77  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
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