More than 300 homologs were found in PanDaTox collection
for query gene Arth_2263 on replicon NC_008541
Organism: Arthrobacter sp. FB24



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011886  Achl_2000  carbamoyl phosphate synthase small subunit  92.97 
 
 
428 aa  738    Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000251671 
 
 
-
 
NC_008541  Arth_2263  carbamoyl phosphate synthase small subunit  100 
 
 
420 aa  862    Arthrobacter sp. FB24  Bacteria  normal  0.181479  n/a   
 
 
-
 
NC_013131  Caci_2404  carbamoyl-phosphate synthase, small subunit  67.86 
 
 
392 aa  542  1e-153  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_17990  carbamoyl-phosphate synthase small subunit  67.86 
 
 
420 aa  541  9.999999999999999e-153  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1322  carbamoyl-phosphate synthase, small subunit  65.9 
 
 
414 aa  526  1e-148  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.125881 
 
 
-
 
NC_012803  Mlut_12590  carbamoyl-phosphate synthase small subunit  66.41 
 
 
394 aa  523  1e-147  Micrococcus luteus NCTC 2665  Bacteria  normal  0.188848  n/a   
 
 
-
 
NC_014151  Cfla_1845  carbamoyl-phosphate synthase, small subunit  69.79 
 
 
405 aa  520  1e-146  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.295776 
 
 
-
 
NC_008578  Acel_1299  carbamoyl phosphate synthase small subunit  66.41 
 
 
395 aa  516  1.0000000000000001e-145  Acidothermus cellulolyticus 11B  Bacteria  normal  0.161991  hitchhiker  0.00596115 
 
 
-
 
NC_013530  Xcel_1711  carbamoyl-phosphate synthase, small subunit  65.8 
 
 
413 aa  511  1e-144  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0172822  n/a   
 
 
-
 
NC_013757  Gobs_3133  carbamoyl-phosphate synthase, small subunit  68 
 
 
388 aa  508  1e-143  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.266223  n/a   
 
 
-
 
NC_008699  Noca_2430  carbamoyl phosphate synthase small subunit  68.97 
 
 
378 aa  505  9.999999999999999e-143  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0084  carbamoyl phosphate synthase small subunit  62.72 
 
 
407 aa  503  1e-141  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2807  Carbamoyl-phosphate synthase (glutamine- hydrolyzing)  65.8 
 
 
400 aa  499  1e-140  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_12680  carbamoyl-phosphate synthase small subunit  65.03 
 
 
423 aa  500  1e-140  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.20639  normal  0.0925455 
 
 
-
 
NC_009664  Krad_3002  carbamoyl phosphate synthase small subunit  62.44 
 
 
397 aa  496  1e-139  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.541041 
 
 
-
 
NC_012669  Bcav_2037  carbamoyl-phosphate synthase, small subunit  64.48 
 
 
405 aa  489  1e-137  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0185668 
 
 
-
 
NC_013721  HMPREF0424_0918  carbamoyl-phosphate synthase, small subunit  59.13 
 
 
403 aa  483  1e-135  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009921  Franean1_1709  carbamoyl phosphate synthase small subunit  63.61 
 
 
397 aa  479  1e-134  Frankia sp. EAN1pec  Bacteria  normal  0.0706412  normal  0.0202078 
 
 
-
 
NC_014210  Ndas_3103  carbamoyl-phosphate synthase, small subunit  63.83 
 
 
397 aa  474  1e-132  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.450122  normal 
 
 
-
 
NC_013159  Svir_15580  carbamoyl-phosphate synthase small subunit  61.3 
 
 
378 aa  471  1e-132  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_14760  carbamoyl-phosphate synthase small subunit  60.86 
 
 
402 aa  470  1.0000000000000001e-131  Brachybacterium faecium DSM 4810  Bacteria  normal  0.865636  n/a   
 
 
-
 
NC_014158  Tpau_2582  carbamoyl-phosphate synthase, small subunit  59.74 
 
 
378 aa  465  9.999999999999999e-131  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.659057  n/a   
 
 
-
 
NC_009953  Sare_1848  carbamoyl-phosphate synthase, small subunit  62.89 
 
 
386 aa  462  1e-129  Salinispora arenicola CNS-205  Bacteria  normal  0.293096  normal 
 
 
-
 
NC_013510  Tcur_3013  carbamoyl-phosphate synthase, small subunit  61.46 
 
 
377 aa  461  1e-129  Thermomonospora curvata DSM 43183  Bacteria  normal  0.225095  n/a   
 
 
-
 
NC_009380  Strop_1855  carbamoyl-phosphate synthase, small subunit  63.32 
 
 
386 aa  462  1e-129  Salinispora tropica CNB-440  Bacteria  normal  0.459247  normal 
 
 
-
 
NC_013441  Gbro_2339  carbamoyl-phosphate synthase, small subunit  63.1 
 
 
378 aa  460  9.999999999999999e-129  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1056  carbamoyl-phosphate synthase small subunit  58.21 
 
 
416 aa  457  1e-127  Thermobifida fusca YX  Bacteria  normal  0.964387  n/a   
 
 
-
 
NC_013235  Namu_4276  carbamoyl-phosphate synthase, small subunit  59.23 
 
 
404 aa  457  1e-127  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.381159 
 
 
-
 
NC_014165  Tbis_1354  carbamoyl-phosphate synthase small subunit  62.37 
 
 
372 aa  457  1e-127  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0370749 
 
 
-
 
NC_013093  Amir_5242  carbamoyl-phosphate synthase, small subunit  61.11 
 
 
370 aa  455  1e-127  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3152  carbamoyl-phosphate synthase small subunit  56.49 
 
 
412 aa  454  1.0000000000000001e-126  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.322749  hitchhiker  0.000625968 
 
 
-
 
NC_008726  Mvan_2663  carbamoyl phosphate synthase small subunit  60.95 
 
 
376 aa  454  1.0000000000000001e-126  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2407  carbamoyl phosphate synthase small subunit  59.79 
 
 
387 aa  449  1e-125  Mycobacterium sp. JLS  Bacteria  normal  0.263156  normal 
 
 
-
 
NC_007777  Francci3_3199  carbamoyl phosphate synthase small subunit  59.15 
 
 
421 aa  449  1e-125  Frankia sp. CcI3  Bacteria  decreased coverage  0.00261776  normal 
 
 
-
 
NC_008146  Mmcs_2366  carbamoyl phosphate synthase small subunit  59.79 
 
 
387 aa  449  1e-125  Mycobacterium sp. MCS  Bacteria  normal  0.122091  n/a   
 
 
-
 
NC_008705  Mkms_2413  carbamoyl phosphate synthase small subunit  59.79 
 
 
387 aa  449  1e-125  Mycobacterium sp. KMS  Bacteria  normal  normal  0.199018 
 
 
-
 
NC_009338  Mflv_3744  carbamoyl phosphate synthase small subunit  59.74 
 
 
387 aa  446  1.0000000000000001e-124  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.36566  normal  0.0290185 
 
 
-
 
NC_009565  TBFG_11412  carbamoyl phosphate synthase small subunit  61.07 
 
 
376 aa  447  1.0000000000000001e-124  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00978215  normal  0.266084 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  51.79 
 
 
386 aa  360  3e-98  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  53.28 
 
 
386 aa  360  4e-98  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  49.21 
 
 
379 aa  348  8e-95  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  51.7 
 
 
374 aa  348  8e-95  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  49.61 
 
 
391 aa  346  4e-94  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  47.91 
 
 
391 aa  346  5e-94  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  46.46 
 
 
389 aa  343  4e-93  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  43.97 
 
 
393 aa  343  5e-93  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0283036 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  46.53 
 
 
384 aa  342  5.999999999999999e-93  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  47.69 
 
 
388 aa  341  2e-92  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  47.52 
 
 
385 aa  340  2e-92  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  47.49 
 
 
376 aa  338  9e-92  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  48.96 
 
 
372 aa  338  9.999999999999999e-92  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  46.88 
 
 
380 aa  338  9.999999999999999e-92  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  48.45 
 
 
380 aa  338  9.999999999999999e-92  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  46.88 
 
 
380 aa  338  9.999999999999999e-92  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  48.11 
 
 
358 aa  336  3.9999999999999995e-91  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_009976  P9211_06931  carbamoyl phosphate synthase small subunit  46.34 
 
 
380 aa  336  5e-91  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.0298336  normal  0.187512 
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  48.95 
 
 
373 aa  335  7.999999999999999e-91  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_007404  Tbd_1127  carbamoyl-phosphate synthase small subunit  48.44 
 
 
379 aa  335  1e-90  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.390679  normal 
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  46.3 
 
 
393 aa  334  1e-90  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0542874 
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  48.69 
 
 
373 aa  333  2e-90  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_0848  carbamoyl-phosphate synthase, small subunit  46.27 
 
 
398 aa  334  2e-90  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.287672 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  46.32 
 
 
369 aa  333  4e-90  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  44.35 
 
 
356 aa  332  5e-90  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  46.03 
 
 
385 aa  333  5e-90  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  45.2 
 
 
397 aa  330  2e-89  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_09281  carbamoyl phosphate synthase small subunit  45.6 
 
 
384 aa  330  2e-89  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.87193  normal  0.0301636 
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  48.68 
 
 
373 aa  330  2e-89  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  45.74 
 
 
387 aa  331  2e-89  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal 
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  46.61 
 
 
381 aa  331  2e-89  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_010524  Lcho_2823  carbamoyl-phosphate synthase, small subunit  44.72 
 
 
394 aa  330  4e-89  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010513  Xfasm12_0451  carbamoyl phosphate synthase small subunit  46.05 
 
 
399 aa  329  7e-89  Xylella fastidiosa M12  Bacteria  normal  0.758109  n/a   
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  46.49 
 
 
381 aa  329  7e-89  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  46.65 
 
 
359 aa  328  8e-89  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_013165  Shel_13220  carbamoyl-phosphate synthase small subunit  45.3 
 
 
467 aa  328  9e-89  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.363669  normal  0.801105 
 
 
-
 
NC_007335  PMN2A_0259  carbamoyl phosphate synthase small subunit  45.34 
 
 
384 aa  328  1.0000000000000001e-88  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2036  carbamoyl phosphate synthase small subunit  45.65 
 
 
378 aa  328  2.0000000000000001e-88  Ralstonia pickettii 12J  Bacteria  normal  0.534876  normal 
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  46.34 
 
 
381 aa  327  2.0000000000000001e-88  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_009656  PSPA7_5478  carbamoyl phosphate synthase small subunit  46.11 
 
 
378 aa  327  2.0000000000000001e-88  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  44.27 
 
 
383 aa  327  2.0000000000000001e-88  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  46.27 
 
 
379 aa  327  2.0000000000000001e-88  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  46.58 
 
 
374 aa  327  3e-88  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  46.34 
 
 
381 aa  327  3e-88  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0392  carbamoyl phosphate synthase small subunit  45.45 
 
 
399 aa  327  3e-88  Xylella fastidiosa M23  Bacteria  normal  0.166847  n/a   
 
 
-
 
NC_012856  Rpic12D_1728  carbamoyl phosphate synthase small subunit  45.65 
 
 
378 aa  327  3e-88  Ralstonia pickettii 12D  Bacteria  normal  0.590257  normal  0.961099 
 
 
-
 
NC_003295  RSc1519  carbamoyl phosphate synthase small subunit  44.62 
 
 
378 aa  326  4.0000000000000003e-88  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  46.07 
 
 
381 aa  326  6e-88  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  46.07 
 
 
381 aa  325  7e-88  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  46.07 
 
 
381 aa  325  7e-88  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1256  carbamoyl phosphate synthase small subunit  45.59 
 
 
391 aa  325  7e-88  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  46.07 
 
 
381 aa  325  7e-88  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  46.07 
 
 
381 aa  325  7e-88  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  44.85 
 
 
366 aa  325  8.000000000000001e-88  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  46.58 
 
 
374 aa  325  9e-88  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_007947  Mfla_0778  carbamoyl-phosphate synthase small subunit  45.91 
 
 
376 aa  325  9e-88  Methylobacillus flagellatus KT  Bacteria  normal  0.42563  hitchhiker  0.000147727 
 
 
-
 
NC_010717  PXO_00088  carbamoyl phosphate synthase small subunit  45.08 
 
 
390 aa  325  1e-87  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.562291  n/a   
 
 
-
 
NC_010622  Bphy_0873  carbamoyl phosphate synthase small subunit  46.39 
 
 
384 aa  324  2e-87  Burkholderia phymatum STM815  Bacteria  normal  0.644445  normal  0.264285 
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  45.81 
 
 
381 aa  324  2e-87  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_011662  Tmz1t_1731  carbamoyl phosphate synthase small subunit  45.79 
 
 
380 aa  324  2e-87  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3621  carbamoyl phosphate synthase small subunit  45.69 
 
 
382 aa  323  3e-87  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  48.05 
 
 
386 aa  323  3e-87  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
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