More than 300 homologs were found in PanDaTox collection
for query gene Sfum_0009 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  100 
 
 
391 aa  813    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  57.56 
 
 
376 aa  438  1e-121  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  56.68 
 
 
380 aa  432  1e-120  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  55.23 
 
 
374 aa  420  1e-116  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  57.14 
 
 
373 aa  419  1e-116  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  55.8 
 
 
373 aa  416  9.999999999999999e-116  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  55.8 
 
 
374 aa  416  9.999999999999999e-116  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  55.56 
 
 
373 aa  416  9.999999999999999e-116  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  56.33 
 
 
374 aa  417  9.999999999999999e-116  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  55.8 
 
 
373 aa  417  9.999999999999999e-116  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  56.37 
 
 
373 aa  412  1e-114  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  56.33 
 
 
374 aa  413  1e-114  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  56.33 
 
 
374 aa  413  1e-114  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  54.99 
 
 
373 aa  409  1e-113  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  54.05 
 
 
372 aa  411  1e-113  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  53.95 
 
 
373 aa  409  1e-113  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  55.08 
 
 
386 aa  406  1.0000000000000001e-112  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  53.91 
 
 
386 aa  406  1.0000000000000001e-112  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_013223  Dret_1071  carbamoyl-phosphate synthase, small subunit  54.2 
 
 
369 aa  402  1e-111  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0749952  normal  0.228018 
 
 
-
 
NC_007519  Dde_3646  carbamoyl phosphate synthase small subunit  54.42 
 
 
375 aa  398  9.999999999999999e-111  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  54.38 
 
 
379 aa  398  9.999999999999999e-111  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_008751  Dvul_0268  carbamoyl phosphate synthase small subunit  55.23 
 
 
375 aa  399  9.999999999999999e-111  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.583908 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  55 
 
 
380 aa  396  1e-109  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  53.85 
 
 
383 aa  397  1e-109  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  53.74 
 
 
369 aa  397  1e-109  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  55.23 
 
 
391 aa  397  1e-109  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  55 
 
 
380 aa  396  1e-109  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2370  carbamoyl phosphate synthase small subunit  54.47 
 
 
376 aa  397  1e-109  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.82733 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  54.45 
 
 
389 aa  393  1e-108  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  55.61 
 
 
388 aa  394  1e-108  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  55.19 
 
 
361 aa  393  1e-108  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  54.52 
 
 
384 aa  394  1e-108  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_013173  Dbac_0133  carbamoyl-phosphate synthase, small subunit  52.55 
 
 
378 aa  390  1e-107  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  53.08 
 
 
369 aa  390  1e-107  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  53.53 
 
 
359 aa  388  1e-106  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  52.55 
 
 
369 aa  385  1e-106  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_013165  Shel_13220  carbamoyl-phosphate synthase small subunit  50.87 
 
 
467 aa  387  1e-106  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.363669  normal  0.801105 
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  52.57 
 
 
358 aa  384  1e-105  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  53.19 
 
 
385 aa  385  1e-105  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  52.28 
 
 
367 aa  384  1e-105  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_2060  carbamoyl phosphate synthase small subunit  49.36 
 
 
394 aa  384  1e-105  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.745912 
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  51.88 
 
 
377 aa  382  1e-105  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  52.8 
 
 
367 aa  379  1e-104  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  50.66 
 
 
372 aa  380  1e-104  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2703  carbamoyl-phosphate synthase small subunit  50 
 
 
388 aa  378  1e-104  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.614253 
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  50.4 
 
 
381 aa  379  1e-104  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  51.2 
 
 
366 aa  380  1e-104  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  50.13 
 
 
381 aa  377  1e-103  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  50.13 
 
 
381 aa  377  1e-103  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  50.13 
 
 
381 aa  377  1e-103  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4432  carbamoyl phosphate synthase small subunit  49.74 
 
 
380 aa  377  1e-103  Burkholderia sp. 383  Bacteria  hitchhiker  0.00120805  normal 
 
 
-
 
NC_008820  P9303_15771  carbamoyl phosphate synthase small subunit  52.28 
 
 
379 aa  375  1e-103  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  50.13 
 
 
381 aa  377  1e-103  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  50.13 
 
 
381 aa  377  1e-103  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  50 
 
 
376 aa  377  1e-103  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  50.13 
 
 
381 aa  377  1e-103  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  50.13 
 
 
381 aa  377  1e-103  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  49.73 
 
 
356 aa  372  1e-102  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  52.17 
 
 
359 aa  372  1e-102  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_002976  SERP0768  carbamoyl phosphate synthase small subunit  48.63 
 
 
366 aa  372  1e-102  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  52.04 
 
 
359 aa  373  1e-102  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_009091  P9301_09071  carbamoyl phosphate synthase small subunit  48.28 
 
 
379 aa  372  1e-102  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4242  carbamoyl-phosphate synthase, small subunit  50.95 
 
 
376 aa  373  1e-102  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  51.08 
 
 
385 aa  373  1e-102  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_011083  SeHA_C0070  carbamoyl phosphate synthase small subunit  50.8 
 
 
391 aa  372  1e-102  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0809  carbamoyl phosphate synthase small subunit  49.21 
 
 
380 aa  374  1e-102  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1290  carbamoyl phosphate synthase small subunit  49.21 
 
 
380 aa  374  1e-102  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0948613  n/a   
 
 
-
 
NC_010508  Bcenmc03_1261  carbamoyl phosphate synthase small subunit  49.21 
 
 
380 aa  374  1e-102  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0131767  normal  0.191599 
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  52.41 
 
 
381 aa  371  1e-102  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_011205  SeD_A0072  carbamoyl phosphate synthase small subunit  50.8 
 
 
382 aa  372  1e-102  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.399436  normal  0.955538 
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  49.08 
 
 
379 aa  373  1e-102  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_003295  RSc1519  carbamoyl phosphate synthase small subunit  49.07 
 
 
378 aa  369  1e-101  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  49.08 
 
 
379 aa  370  1e-101  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3203  carbamoyl-phosphate synthase, small subunit  51.49 
 
 
368 aa  369  1e-101  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_984  carbamoyl-phosphate synthase, small subunit  48.4 
 
 
364 aa  369  1e-101  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2036  carbamoyl phosphate synthase small subunit  48.68 
 
 
378 aa  370  1e-101  Ralstonia pickettii 12J  Bacteria  normal  0.534876  normal 
 
 
-
 
NC_012856  Rpic12D_1728  carbamoyl phosphate synthase small subunit  48.42 
 
 
378 aa  369  1e-101  Ralstonia pickettii 12D  Bacteria  normal  0.590257  normal  0.961099 
 
 
-
 
NC_009455  DehaBAV1_1011  carbamoyl phosphate synthase small subunit  47.86 
 
 
364 aa  370  1e-101  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_0848  carbamoyl phosphate synthase small subunit  48.68 
 
 
379 aa  370  1e-101  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3013  carbamoyl-phosphate synthase, small subunit  51.06 
 
 
377 aa  371  1e-101  Thermomonospora curvata DSM 43183  Bacteria  normal  0.225095  n/a   
 
 
-
 
NC_008148  Rxyl_1478  carbamoyl-phosphate synthase small subunit  52.24 
 
 
369 aa  370  1e-101  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.515532  n/a   
 
 
-
 
NC_011094  SeSA_A0074  carbamoyl phosphate synthase small subunit  50.53 
 
 
382 aa  369  1e-101  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0873  carbamoyl phosphate synthase small subunit  50 
 
 
384 aa  371  1e-101  Burkholderia phymatum STM815  Bacteria  normal  0.644445  normal  0.264285 
 
 
-
 
NC_011080  SNSL254_A0070  carbamoyl phosphate synthase small subunit  50.8 
 
 
382 aa  371  1e-101  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  49.73 
 
 
357 aa  370  1e-101  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1201  carbamoyl phosphate synthase small subunit  47.86 
 
 
364 aa  368  1e-100  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1915  carbamoyl-phosphate synthase, small subunit  49.61 
 
 
390 aa  367  1e-100  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B0073  carbamoyl phosphate synthase small subunit  50 
 
 
382 aa  366  1e-100  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1179  carbamoyl phosphate synthase small subunit  49.74 
 
 
381 aa  368  1e-100  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.381236 
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  49.6 
 
 
386 aa  368  1e-100  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  49.6 
 
 
383 aa  366  1e-100  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2356  carbamoyl-phosphate synthase, small subunit  48.68 
 
 
388 aa  366  1e-100  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1256  carbamoyl phosphate synthase small subunit  50 
 
 
391 aa  366  1e-100  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  46.88 
 
 
392 aa  365  1e-100  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2195  carbamoyl phosphate synthase small subunit  50.13 
 
 
382 aa  366  1e-100  Cupriavidus metallidurans CH34  Bacteria  normal  0.0764461  normal  0.137113 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  51.05 
 
 
381 aa  365  1e-100  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_012560  Avin_42940  carbamoyl phosphate synthase small subunit  50 
 
 
378 aa  365  1e-100  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  50.81 
 
 
381 aa  368  1e-100  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
NC_010084  Bmul_2030  carbamoyl phosphate synthase small subunit  49.47 
 
 
380 aa  368  1e-100  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.115427  normal 
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  46.88 
 
 
392 aa  365  1e-100  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
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