Gene Cyan8802_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_0390 
Symbol 
ID8389695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp381519 
End bp382661 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content43% 
IMG OID644978428 
Productcarbamoyl phosphate synthase small subunit 
Protein accessionYP_003136185 
Protein GI257058297 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATAG CAAAGGCGAC ACCAGCCCTA TTAATGTTAG CAGATGGAAC TTCCTTTGAA 
GGTTTGTCCT TTGGAGCAAA AGGAACAACC CTCGGAGAAG TGGTCTTTAA TACGGGTATG
ACGGGATATC AAGAAGTGTT AACCGATCCC AGTTATTGCG GTCAAATTGT CACCTTTACC
TATCCAGAAT TGGGCAATAC GGGGGTTAAC CCTGATGATG AAGAATCTTC CCGTCCCCAA
GTTAAAGGGG TGATTGCGCG TAATATTACT TATCGTCCCA GTAACTGGCG TTCCACGGAA
TCTTTACCGG ATTATTTGCT GCGTCACAAC GTTATTGGTA TTTATGGACT CGATACTCGG
GCTTTAACCC GTAAAATTCG GGCTGTGGGG GCGATCAATG GCGCAATTTC TACGGAAATC
CTCGAACCTA CTGAGTTACT CCGTCAGGTA CAATTAACCC CCAGTATGGC AGGACTGAAT
TTAGTCAAAG AGGTTACGAC CAAAGAGGTT TATGAGTGGT TTACTCCGAC AGACTCCCAG
TGGGAATTTA ATCCCAAGAA CCAGACGATG GATAAGGGAA CCTTAAAAGT TGTAGCCATT
GATTTTGGAG TTAAACGCAA TATTTTACGC CGTTTAGCGA GTTATGGCTG TCATGTGATT
GTCGTTCCCG CTAATACCCC GGCCGAGGAG ATTTTAAAGT ACGATCCTGA TGGGATTTTC
TTATCTAATG GTCCGGGTGA TCCTTCTGCT GTTCAAGAGG GAATTGAAAC AGCAAAAGAA
CTGATTAAAG CGGGTAAACC GACCTTTGGG ATCTGTATGG GACACCAAAT TTTAGGGCTA
TCTTTGGGGG CTCAAACTTT TAAGTTAAAG TTTGGTCATC GCGGATTAAA TCAGCCTTGT
GGATTAAATC AAGAAGTAGA AATTACCAGT CAAAATCATG GGTTTGCTGT GACTGATAAA
TCCTTGGGGG CTGATGTGGA AATTACTCAC TTGAATTTGA ACGATCACAC TATTGCCGGA
TTATCCCATA AAACCTTACC CTTTTTCTCA GTGCAATATC ACCCAGAGGC AAGTCCTGGA
CCCCACGATG CCGATTATTT ATTCGAGAAG TTTGTTAATT TAATGCGCGA ACATAAAAAG
TAA
 
Protein sequence
MAIAKATPAL LMLADGTSFE GLSFGAKGTT LGEVVFNTGM TGYQEVLTDP SYCGQIVTFT 
YPELGNTGVN PDDEESSRPQ VKGVIARNIT YRPSNWRSTE SLPDYLLRHN VIGIYGLDTR
ALTRKIRAVG AINGAISTEI LEPTELLRQV QLTPSMAGLN LVKEVTTKEV YEWFTPTDSQ
WEFNPKNQTM DKGTLKVVAI DFGVKRNILR RLASYGCHVI VVPANTPAEE ILKYDPDGIF
LSNGPGDPSA VQEGIETAKE LIKAGKPTFG ICMGHQILGL SLGAQTFKLK FGHRGLNQPC
GLNQEVEITS QNHGFAVTDK SLGADVEITH LNLNDHTIAG LSHKTLPFFS VQYHPEASPG
PHDADYLFEK FVNLMREHKK