Gene Oter_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1915 
Symbol 
ID6207082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2404180 
End bp2405352 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content63% 
IMG OID641691563 
Productcarbamoyl-phosphate synthase, small subunit 
Protein accessionYP_001818798 
Protein GI182413732 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCAT CCAAGCCCGG AGTCCTCGCC CTCGAAGATG GCACAGTGTA TCGCGGTCTC 
GCTTTTGGCG CCGAGGCGAC AATCGCCGGC GAATGCGTCT TCAACACCTC GATGACCGGG
TATCAGGAGA TCATCACTGA CCCGTCGTAT TTCGGTCAGA TTGTAACGAT GACCGCGGTG
CAAATCGGCA ACTACGGGCT CACGCCGGAA GATGAGGAAT CGAGCGGACC GAAATGCGCC
GGGCTCGTCG TCCGCGAGCT TTCGCCGGTG GTTTCCAACT GGCGCGCCAC GATTTCGCTT
TCCGACTATC TCGCCAAAAA CGGCATCCCC GGGCTCAGTG AGATCGACAC CCGCGCGCTG
ACCAAGAAGC TGCGCGTCGA TGGCGCGATG AAGTGCTGCC TTTCGACGCT GCCGATCAGC
GACGACGAAG CCGTCCGGCG CGCCCGCGAG TGGCAGGACA TGGCTGGCAG CGATTATGTG
AAGGACGTCA CCTGCGCGCA GCCCTACCTC TGGCAGCCCG ACGCGGCGGC GAACTACAAC
GAGCCTTACC TGCCGGTGGG CACGACGATG AACGCGCCGG CGGTTCCGAG CCGCAAGTTC
CGCGTCGCCG CGTTCGACTA CGGCGCGAAG CACTCGATCT TCCGCAAGCT CGTCCGACAC
GGCTTCGACG TGCAGGTGTT CCCGTCCACC TCCACGCTCG AACAGATCCG CGAGCAAAAT
CCGGACGCGG TGTTTCTCTC CAACGGCCCC GGCGATCCCG CAGCGCTGCG CTACCTGCAT
AAAACCGTCA CCGGTCTGCT GCCCGACTAC CCCGTGTTCG GCATCTGTCT CGGCCACCAG
ATGATCACGC ACGCGCTCGG CGGCGAAACG TACAAGCTCA AGTTCGGCCA CCGCGGCGGC
AATCAGCCGG TCAAAAACCT GGAGACGGGC AAAGTGTCGA TCACCGCGCA GAACCATGGT
TTTGCCACCG ATCCGAAATC GATCGAGCAG CGCGGCGCGA AGGTCACCGA GATCAATCTC
AACGACCAGA CCGTCGAGGG GCTGCGCCAC ACCTCGCTGC CGGTCTTCAG CGTGCAATAT
CACCCCGAAG CCGCGCCCGG CCCGAACGAC GCCGATCCGC TCTTCATCGA TTTCTACAAT
CTGGTCGCCG CGCGCAAAGC CGGGAAGATC TGA
 
Protein sequence
MSSSKPGVLA LEDGTVYRGL AFGAEATIAG ECVFNTSMTG YQEIITDPSY FGQIVTMTAV 
QIGNYGLTPE DEESSGPKCA GLVVRELSPV VSNWRATISL SDYLAKNGIP GLSEIDTRAL
TKKLRVDGAM KCCLSTLPIS DDEAVRRARE WQDMAGSDYV KDVTCAQPYL WQPDAAANYN
EPYLPVGTTM NAPAVPSRKF RVAAFDYGAK HSIFRKLVRH GFDVQVFPST STLEQIREQN
PDAVFLSNGP GDPAALRYLH KTVTGLLPDY PVFGICLGHQ MITHALGGET YKLKFGHRGG
NQPVKNLETG KVSITAQNHG FATDPKSIEQ RGAKVTEINL NDQTVEGLRH TSLPVFSVQY
HPEAAPGPND ADPLFIDFYN LVAARKAGKI