Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1915 |
Symbol | |
ID | 6207082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2404180 |
End bp | 2405352 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641691563 |
Product | carbamoyl-phosphate synthase, small subunit |
Protein accession | YP_001818798 |
Protein GI | 182413732 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCAT CCAAGCCCGG AGTCCTCGCC CTCGAAGATG GCACAGTGTA TCGCGGTCTC GCTTTTGGCG CCGAGGCGAC AATCGCCGGC GAATGCGTCT TCAACACCTC GATGACCGGG TATCAGGAGA TCATCACTGA CCCGTCGTAT TTCGGTCAGA TTGTAACGAT GACCGCGGTG CAAATCGGCA ACTACGGGCT CACGCCGGAA GATGAGGAAT CGAGCGGACC GAAATGCGCC GGGCTCGTCG TCCGCGAGCT TTCGCCGGTG GTTTCCAACT GGCGCGCCAC GATTTCGCTT TCCGACTATC TCGCCAAAAA CGGCATCCCC GGGCTCAGTG AGATCGACAC CCGCGCGCTG ACCAAGAAGC TGCGCGTCGA TGGCGCGATG AAGTGCTGCC TTTCGACGCT GCCGATCAGC GACGACGAAG CCGTCCGGCG CGCCCGCGAG TGGCAGGACA TGGCTGGCAG CGATTATGTG AAGGACGTCA CCTGCGCGCA GCCCTACCTC TGGCAGCCCG ACGCGGCGGC GAACTACAAC GAGCCTTACC TGCCGGTGGG CACGACGATG AACGCGCCGG CGGTTCCGAG CCGCAAGTTC CGCGTCGCCG CGTTCGACTA CGGCGCGAAG CACTCGATCT TCCGCAAGCT CGTCCGACAC GGCTTCGACG TGCAGGTGTT CCCGTCCACC TCCACGCTCG AACAGATCCG CGAGCAAAAT CCGGACGCGG TGTTTCTCTC CAACGGCCCC GGCGATCCCG CAGCGCTGCG CTACCTGCAT AAAACCGTCA CCGGTCTGCT GCCCGACTAC CCCGTGTTCG GCATCTGTCT CGGCCACCAG ATGATCACGC ACGCGCTCGG CGGCGAAACG TACAAGCTCA AGTTCGGCCA CCGCGGCGGC AATCAGCCGG TCAAAAACCT GGAGACGGGC AAAGTGTCGA TCACCGCGCA GAACCATGGT TTTGCCACCG ATCCGAAATC GATCGAGCAG CGCGGCGCGA AGGTCACCGA GATCAATCTC AACGACCAGA CCGTCGAGGG GCTGCGCCAC ACCTCGCTGC CGGTCTTCAG CGTGCAATAT CACCCCGAAG CCGCGCCCGG CCCGAACGAC GCCGATCCGC TCTTCATCGA TTTCTACAAT CTGGTCGCCG CGCGCAAAGC CGGGAAGATC TGA
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Protein sequence | MSSSKPGVLA LEDGTVYRGL AFGAEATIAG ECVFNTSMTG YQEIITDPSY FGQIVTMTAV QIGNYGLTPE DEESSGPKCA GLVVRELSPV VSNWRATISL SDYLAKNGIP GLSEIDTRAL TKKLRVDGAM KCCLSTLPIS DDEAVRRARE WQDMAGSDYV KDVTCAQPYL WQPDAAANYN EPYLPVGTTM NAPAVPSRKF RVAAFDYGAK HSIFRKLVRH GFDVQVFPST STLEQIREQN PDAVFLSNGP GDPAALRYLH KTVTGLLPDY PVFGICLGHQ MITHALGGET YKLKFGHRGG NQPVKNLETG KVSITAQNHG FATDPKSIEQ RGAKVTEINL NDQTVEGLRH TSLPVFSVQY HPEAAPGPND ADPLFIDFYN LVAARKAGKI
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