More than 300 homologs were found in PanDaTox collection
for query gene PMT9312_0848 on replicon NC_007577
Organism: Prochlorococcus marinus str. MIT 9312



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007577  PMT9312_0848  carbamoyl phosphate synthase small subunit  100 
 
 
379 aa  776    Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_09071  carbamoyl phosphate synthase small subunit  84.43 
 
 
379 aa  672    Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  84.96 
 
 
379 aa  673    Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  75.99 
 
 
379 aa  610  1e-173  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_1307  carbamoyl phosphate synthase small subunit  56.99 
 
 
398 aa  472  1e-132  Synechococcus sp. CC9902  Bacteria  normal  0.786161  n/a   
 
 
-
 
NC_009976  P9211_06931  carbamoyl phosphate synthase small subunit  57.29 
 
 
380 aa  464  1e-129  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.0298336  normal  0.187512 
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  53.3 
 
 
386 aa  459  9.999999999999999e-129  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_008820  P9303_15771  carbamoyl phosphate synthase small subunit  55.79 
 
 
379 aa  457  1e-127  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_007335  PMN2A_0259  carbamoyl phosphate synthase small subunit  56.57 
 
 
384 aa  449  1e-125  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_09281  carbamoyl phosphate synthase small subunit  55.26 
 
 
384 aa  445  1.0000000000000001e-124  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.87193  normal  0.0301636 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  55.65 
 
 
380 aa  435  1e-121  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  53.48 
 
 
391 aa  437  1e-121  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  55.65 
 
 
380 aa  435  1e-121  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  56.3 
 
 
379 aa  436  1e-121  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  53.83 
 
 
389 aa  434  1e-120  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  54.74 
 
 
384 aa  428  1e-119  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  54.47 
 
 
388 aa  422  1e-117  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  51.77 
 
 
385 aa  407  1.0000000000000001e-112  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  48.67 
 
 
386 aa  371  1e-102  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  48.14 
 
 
386 aa  374  1e-102  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  48.68 
 
 
391 aa  370  1e-101  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  47.86 
 
 
374 aa  367  1e-100  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  48.39 
 
 
376 aa  359  5e-98  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  45.74 
 
 
372 aa  350  2e-95  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  47.45 
 
 
373 aa  350  3e-95  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1470  carbamoyl phosphate synthase small subunit  45.08 
 
 
397 aa  349  5e-95  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1322  carbamoyl-phosphate synthase, small subunit  46.65 
 
 
414 aa  349  5e-95  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.125881 
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  46.03 
 
 
383 aa  346  5e-94  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  47.99 
 
 
374 aa  345  8e-94  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_007958  RPD_3986  carbamoyl phosphate synthase small subunit  44.91 
 
 
397 aa  344  1e-93  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  48.79 
 
 
373 aa  345  1e-93  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2885  carbamoyl-phosphate synthase small subunit  44.74 
 
 
389 aa  344  2e-93  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  44.09 
 
 
373 aa  344  2e-93  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  46.52 
 
 
367 aa  343  2.9999999999999997e-93  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_0435  carbamoyl phosphate synthase small subunit  45.14 
 
 
392 aa  343  2.9999999999999997e-93  Sphingomonas wittichii RW1  Bacteria  normal  0.29183  normal 
 
 
-
 
NC_007925  RPC_0960  carbamoyl phosphate synthase small subunit  44.82 
 
 
396 aa  343  2.9999999999999997e-93  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0203745 
 
 
-
 
NC_011666  Msil_1622  carbamoyl-phosphate synthase, small subunit  45.55 
 
 
398 aa  343  4e-93  Methylocella silvestris BL2  Bacteria  n/a    decreased coverage  0.0014107 
 
 
-
 
NC_007406  Nwi_2446  carbamoyl phosphate synthase small subunit  44.79 
 
 
396 aa  342  5e-93  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.505949  normal  0.289169 
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  44.35 
 
 
373 aa  342  5e-93  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_007964  Nham_2871  carbamoyl phosphate synthase small subunit  45.08 
 
 
396 aa  342  5e-93  Nitrobacter hamburgensis X14  Bacteria  normal  0.393325  n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  44.09 
 
 
373 aa  342  5e-93  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009370  OSTLU_28074  Carbamoyl-phosphate synthase S chain  45.19 
 
 
415 aa  342  9e-93  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.210414 
 
 
-
 
NC_009972  Haur_4242  carbamoyl-phosphate synthase, small subunit  44.89 
 
 
376 aa  341  1e-92  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0615  carbamoyl-phosphate synthase, small subunit  45.43 
 
 
416 aa  340  2e-92  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.156891 
 
 
-
 
NC_010511  M446_3210  carbamoyl-phosphate synthase, small subunit  44.39 
 
 
405 aa  340  2e-92  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.295908 
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  47.18 
 
 
374 aa  340  2.9999999999999998e-92  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  47.03 
 
 
373 aa  340  2.9999999999999998e-92  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  44.39 
 
 
397 aa  339  4e-92  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4142  carbamoyl phosphate synthase small subunit  43.78 
 
 
397 aa  338  5.9999999999999996e-92  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.164526  normal 
 
 
-
 
NC_011757  Mchl_0626  carbamoyl-phosphate synthase, small subunit  45.17 
 
 
416 aa  338  7e-92  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.265795 
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  44.06 
 
 
381 aa  338  8e-92  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  46.93 
 
 
380 aa  338  9e-92  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  44.06 
 
 
381 aa  338  9e-92  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  46.26 
 
 
369 aa  338  9e-92  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  44.06 
 
 
381 aa  338  9.999999999999999e-92  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  44.06 
 
 
381 aa  338  9.999999999999999e-92  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  44.06 
 
 
381 aa  338  9.999999999999999e-92  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  44.06 
 
 
381 aa  338  9.999999999999999e-92  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_011894  Mnod_4526  carbamoyl-phosphate synthase, small subunit  44.13 
 
 
405 aa  338  9.999999999999999e-92  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.717788  n/a   
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  44.06 
 
 
381 aa  338  9.999999999999999e-92  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  44.09 
 
 
377 aa  338  9.999999999999999e-92  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0591  carbamoyl-phosphate synthase, small subunit  45.17 
 
 
416 aa  337  1.9999999999999998e-91  Methylobacterium populi BJ001  Bacteria  normal  0.88824  normal  0.101077 
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  44.65 
 
 
393 aa  337  1.9999999999999998e-91  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0542874 
 
 
-
 
NC_008781  Pnap_1774  carbamoyl phosphate synthase small subunit  44.71 
 
 
393 aa  336  2.9999999999999997e-91  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.0283036 
 
 
-
 
NC_011830  Dhaf_3203  carbamoyl-phosphate synthase, small subunit  47.73 
 
 
368 aa  336  5e-91  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6791  carbamoyl phosphate synthase small subunit  43.38 
 
 
398 aa  335  7e-91  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0374748 
 
 
-
 
NC_003910  CPS_3459  carbamoyl phosphate synthase small subunit  45.09 
 
 
383 aa  334  1e-90  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  46.9 
 
 
372 aa  334  1e-90  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_010531  Pnec_0848  carbamoyl-phosphate synthase, small subunit  45.17 
 
 
398 aa  335  1e-90  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.287672 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  46.52 
 
 
367 aa  335  1e-90  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_17990  carbamoyl-phosphate synthase small subunit  45.22 
 
 
420 aa  334  1e-90  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  43.54 
 
 
381 aa  334  2e-90  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  47.44 
 
 
373 aa  334  2e-90  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  46.52 
 
 
366 aa  334  2e-90  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  46.07 
 
 
369 aa  333  3e-90  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_007614  Nmul_A0478  carbamoyl-phosphate synthase, small subunit  42.51 
 
 
383 aa  333  3e-90  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  43.98 
 
 
384 aa  333  3e-90  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_008340  Mlg_1982  carbamoyl-phosphate synthase small subunit  44.47 
 
 
386 aa  333  4e-90  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.157941  normal  0.0125598 
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  46.03 
 
 
371 aa  333  4e-90  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_009720  Xaut_1243  carbamoyl phosphate synthase small subunit  42.67 
 
 
411 aa  332  5e-90  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_2036  carbamoyl phosphate synthase small subunit  42.86 
 
 
378 aa  332  6e-90  Ralstonia pickettii 12J  Bacteria  normal  0.534876  normal 
 
 
-
 
NC_003295  RSc1519  carbamoyl phosphate synthase small subunit  42.78 
 
 
378 aa  332  9e-90  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  46.65 
 
 
374 aa  332  9e-90  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  46.65 
 
 
374 aa  331  1e-89  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009457  VC0395_A1968  carbamoyl phosphate synthase small subunit  45.07 
 
 
379 aa  331  1e-89  Vibrio cholerae O395  Bacteria  normal  0.837999  n/a   
 
 
-
 
NC_007510  Bcep18194_A4432  carbamoyl phosphate synthase small subunit  42.86 
 
 
380 aa  331  2e-89  Burkholderia sp. 383  Bacteria  hitchhiker  0.00120805  normal 
 
 
-
 
NC_012856  Rpic12D_1728  carbamoyl phosphate synthase small subunit  42.86 
 
 
378 aa  330  2e-89  Ralstonia pickettii 12D  Bacteria  normal  0.590257  normal  0.961099 
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  43.98 
 
 
381 aa  331  2e-89  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  44.21 
 
 
385 aa  330  3e-89  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_013889  TK90_0698  carbamoyl-phosphate synthase, small subunit  43.51 
 
 
377 aa  330  3e-89  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.110228 
 
 
-
 
NC_010505  Mrad2831_0570  carbamoyl-phosphate synthase, small subunit  44.62 
 
 
410 aa  330  3e-89  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.308304 
 
 
-
 
NC_013205  Aaci_1307  carbamoyl-phosphate synthase, small subunit  43.39 
 
 
368 aa  330  3e-89  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_15580  carbamoyl-phosphate synthase small subunit  43.15 
 
 
378 aa  329  5.0000000000000004e-89  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2679  carbamoyl phosphate synthase small subunit  43.67 
 
 
401 aa  329  5.0000000000000004e-89  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2314  carbamoyl-phosphate synthase, small subunit  43.77 
 
 
402 aa  329  6e-89  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.0322598 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  45.38 
 
 
381 aa  328  8e-89  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  44.86 
 
 
359 aa  328  8e-89  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_010508  Bcenmc03_1261  carbamoyl phosphate synthase small subunit  42.86 
 
 
380 aa  328  9e-89  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0131767  normal  0.191599 
 
 
-
 
NC_009783  VIBHAR_00912  carbamoyl phosphate synthase small subunit  44.06 
 
 
416 aa  328  1.0000000000000001e-88  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009524  PsycPRwf_0834  carbamoyl phosphate synthase small subunit  42.61 
 
 
418 aa  328  1.0000000000000001e-88  Psychrobacter sp. PRwf-1  Bacteria  normal  0.0896746  normal 
 
 
-
 
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