| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1322 |
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| Symbol | |
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| ID | 8380499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1416842 |
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| End bp | 1418086 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645004071 |
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| Product | carbamoyl-phosphate synthase, small subunit |
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| Protein accession | YP_003161281 |
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| Protein GI | 256832554 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.125881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCAC CACTGATTGA CGCCCCCACC ACCCCCGGCG CAGCAGTCCT CGTTCTCGAA
GATGGGCGAA CCTTCACCGG GCGCGCCTAC GGGGCAACAG GAACCACACT GGGTGAGGTT
GTCTTCAACA CCGGCATGAC CGGGTATCAA GAAACCCTCA CGGACCCCTC CTACTACCAA
CAAATCGTCG TCATGACCGC ACCCCACATT GGGAACACCG GTGTCAACGA CGAAGACCCA
GAGTCCGTGC GCATCTGGGT CGCCGGATTC GTCGTCCGTG ACGCTGCACG CACACCGTCC
AACTGGCGAT CCCAACGTGC CCTCGACGAG GAACTCGCCA CCCAAAACAT CGTGTCTATC
TCCGGAATAG ACACCCGCGC ACTGACCCGC CATCTGCGCG AACGCGGCAC CATGCGTGCC
GGAATCTTCT CCGGTGACGC ACTCACCCAC GACGGGTTCC CCCGTCGCAT CACCTCCATG
GTGGAACAAG TACGCCAAGC ACCAACCATG AAGGGCGCCA ACCTCGCCCA CCTGGTCTCC
ACGCAACAGG CCTACACGGT AGAACCTGCA GGACAATTCG CTGGTCACAC TCCGCTTGCC
ACAGTCGTCG CCGTTGACCT GGGAATCAAA TCGATGACCT CACAACGCCT GTCTGAACGA
GGCATCAAAG TCCACGTCAT TCCCGCGAAC TCAACCATCG CCGACATCGA GTCCTACAAC
CCCGATGGAG TGTTCTTCTC CAACGGGCCA GGTGACCCCG AAGCCTCCAC CCATGAAGTT
GACCTCCTCC GCGAAGTCCT CGACCGTAAA ATCCCCTACT TTGGGATCTG CTTCGGGAAC
CAAATCCTTG GCCGTGCCCT GGGGTTTGGC ACCTACAAAC TGCCCTACGG GCACCGCGGA
ATCAACCAAC CTGTCAAAGA CCTCATCACC GGGAAAGTTG AGATCACCTC ACAAAACCAC
GGGTTCGCTG TCGACGCACC TATCGGGGAA GAAACCATCG CCCCCCACGC CAACGGACGG
TACGGAAAGG TCGTTGTCTC CCATATCGGC CTCAACGACA ACGTTGTTGA AGGCCTAGAA
TGCCGCGACA TCCCCGCTTT TTCTGTGCAG TACCACCCTG AAGCAGCGGC AGGCCCACAC
GACGCCGCCT ACCTATTTGA CCGCTTCGTC ACGCTCCTGA CATCAGGGGC AACCACCGCC
ACTGGCCTCT CACGCGCCGA GCGTGTTGCG ACGAAAGAGA GCTGA
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| Protein sequence | MTSPLIDAPT TPGAAVLVLE DGRTFTGRAY GATGTTLGEV VFNTGMTGYQ ETLTDPSYYQ
QIVVMTAPHI GNTGVNDEDP ESVRIWVAGF VVRDAARTPS NWRSQRALDE ELATQNIVSI
SGIDTRALTR HLRERGTMRA GIFSGDALTH DGFPRRITSM VEQVRQAPTM KGANLAHLVS
TQQAYTVEPA GQFAGHTPLA TVVAVDLGIK SMTSQRLSER GIKVHVIPAN STIADIESYN
PDGVFFSNGP GDPEASTHEV DLLREVLDRK IPYFGICFGN QILGRALGFG TYKLPYGHRG
INQPVKDLIT GKVEITSQNH GFAVDAPIGE ETIAPHANGR YGKVVVSHIG LNDNVVEGLE
CRDIPAFSVQ YHPEAAAGPH DAAYLFDRFV TLLTSGATTA TGLSRAERVA TKES
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