| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2314 |
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| Symbol | |
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| ID | 5454561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2484033 |
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| End bp | 2485241 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877893 |
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| Product | carbamoyl-phosphate synthase, small subunit |
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| Protein accession | YP_001413585 |
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| Protein GI | 154252761 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.0322598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGC CTTCTTCCGA CAAACCGATC AACGCGACGA GTAGCCCCAT GACCGCGACC
GAGACACCGA CCGCCCTCCT CGTTCTGAAG GATGGCACGG TGCTTCCAGG GCGCGGCATC
GGCGCGGTCG GCGACGCGGT CGGCGAGGTC TGCTTCAACA CGGCGATCAC GGGCTATCAG
GAAATCCTGA CGGACCCCTC CTATGCCGGC CAGATCATCA CCTTCACCTT CCCCCATATC
GGCAATGTCG GCACCAATGA CGAGGACATC GAGACCTCCA ACCTCGCCTC GCTGTCCGGC
GTGCGCGGCA TGGTGATCCG GGCCGACATC ACCAGCCCCT CCAATTACCG CTCGGCGAAA
CATCTCGATC AGTGGCTGAA GACGCGCGGC ATCATCGGCC TTTCCGGCCT CGACACGCGC
GCGCTGACGC GGCGCATCCG CGAGAAGGGC TCGATCGACG GGCTGATCGC GCATGATCCC
TCCGGCAAGT TCGACATTCC GGCGCTAATC GCGAAGGCGC GCGAATGGCC CGGCATGGTC
GGCCTCGACC TCGTGAAGGA CGTGACCTGC GGCCAGAGCT ACACCTGGAA CGAGGCGCGC
TGGAGATGGG GCTGCGGCTA CGAGCCGGGC CACGAGATGA AACACCGCGT CGTCGCCATC
GACTACGGCA TCAAGCGCAA CATCCTGCGC TGCCTGACGA GCACGGGCTG CGAGGTGACG
GTCGTTCCCG CCGAGACCAA GGCCGAAGAC ATATTGGCGA TGAACCCCGA CGGCGTCTTC
CTCTCGAACG GCCCGGGCGA CCCGGCCGCG ACCGGCGAAT ATGCCGTGCC GGAAATCAAA
AAGCTCGTCG CGAGCGGCAA GCCCGTCTTC GGCATCTGCC TCGGCCACCA GATGCTTGCG
CTGGCCTTGG GCGCGAAGAC CGAAAAGATG CATCAGGGCC ATCACGGCGC GAACCATCCC
GTGAAGGACT ACACGACCGG CAAGGTCGAG ATCACCTCGA TGAACCACGG CTTCGCCGTC
TCTCGCGAGT CGCTGCCCGG CACGGTCGAG GAAACGCATG TCTCGCTCTT CGACGGCTCG
AATTGCGGCA TCCGCCTGAA GGACCGCCCC GTCTTCTCCG TGCAATACCA CCCGGAAGCT
TCGCCGGGCC CGATGGACTC CCATTACCTC TTCGAACGCT TCGTGAAGCT GATCGAGGAG
GGGAAGTGA
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| Protein sequence | MSAPSSDKPI NATSSPMTAT ETPTALLVLK DGTVLPGRGI GAVGDAVGEV CFNTAITGYQ
EILTDPSYAG QIITFTFPHI GNVGTNDEDI ETSNLASLSG VRGMVIRADI TSPSNYRSAK
HLDQWLKTRG IIGLSGLDTR ALTRRIREKG SIDGLIAHDP SGKFDIPALI AKAREWPGMV
GLDLVKDVTC GQSYTWNEAR WRWGCGYEPG HEMKHRVVAI DYGIKRNILR CLTSTGCEVT
VVPAETKAED ILAMNPDGVF LSNGPGDPAA TGEYAVPEIK KLVASGKPVF GICLGHQMLA
LALGAKTEKM HQGHHGANHP VKDYTTGKVE ITSMNHGFAV SRESLPGTVE ETHVSLFDGS
NCGIRLKDRP VFSVQYHPEA SPGPMDSHYL FERFVKLIEE GK
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