| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2871 |
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| Symbol | |
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| ID | 4032882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3164959 |
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| End bp | 3166149 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637971314 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_578099 |
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| Protein GI | 92118370 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.393325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAT CGGAAAACGC TTCAGCCTGG CCGGATCTCA AGCCGACCGC GCTCCTCGTG
CTCGCCGACG GCACCGTGCT CGAAGGCTTC GGCCTCGGCG CGGAGGGCCA GGCGGTCGGG
GAAGTCTGCT TCAACACCGC GATGACCGGC TACGAGGAAA TCCTCACCGA TCCCTCCTAT
GCCGGGCAGC TCATTACCTT CACCTTCCCG CATATCGGCA ACGTCGGCAC CAACGACGAG
GACATCGAAA CGGTGAACAT GGCGGCGACG CCGGGCGCGC GCGGCGTCAT CCTGCGCAGC
GCCATCACCT CACCCTCGAA CTACCGTGCC GCCAAACACC TCGACGCCTG GCTCAGGGCG
CGCGGCATCA TCGGCATCTC CGGCATCGAC ACCCGCGCGC TGACCGCGCT GATCCGCACC
AAGGGTATGC CCAACGCGGT GGTCGCGCAC GCCAAGGACG GCAAGTTCGA TCTGCACGGA
TTGAAAGAGG AGGCGCGCGA GTGGCCGGGC CTCGAAGGCA TGGACCTGGT GCCGATGGTG
ACATCGAGCC AGCGCTACAC TTGGGACGAG ACGCCATGGG TGTGGGGCGA GGGATTTGGC
CGGCAGGACA AGCCGGAATT CACCGTCGTC GCTGTCGACT ACGGCATCAA GCGCAACATC
CTGCGCCTGC TCGCCGGCGA AGGCTGCAAG ATCACGGTGG TGCCGGCGAC CACTTCGGCT
GAAGACATTC TGGCGATGAA GCCCGACGGC GTGTTCCTGT CGAACGGCCC CGGCGATCCG
GCCGAGACCG GCAAGTACGC CGTGCCGATG ATCCGCAAAG TGATCGAGTC GGGCACGCCG
ACCTTCGGCA TTTGTCTGGG CCACCAGATG CTCGGTCTCG CGGTCGGCGC GAAGACGAAA
AAGATGCATC AGGGCCATCA CGGCGCCAAT CATCCGGTCC GGGACGAGAC CACCGGTAAG
GTGGAGATCA CCTCCATGAA TCATGGTTTT GCCGTAGACG AGGCAACGCT GCCGAAGGGC
GCGAAGCAGA CCCACATCTC GCTGTTCGAC GGCTCCAACT GCGGCATCGA ACTCGAGGGC
AAGCCGGTGT TCTCCGTGCA GTATCACCCG GAGGCTTCGC CGGGGCCGCG CGACTCGCAC
TACCTGTTCA AGCGCTTCGC GGAACTGATG CGCGAGAACA AGCGGGCGTA G
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| Protein sequence | MTTSENASAW PDLKPTALLV LADGTVLEGF GLGAEGQAVG EVCFNTAMTG YEEILTDPSY
AGQLITFTFP HIGNVGTNDE DIETVNMAAT PGARGVILRS AITSPSNYRA AKHLDAWLRA
RGIIGISGID TRALTALIRT KGMPNAVVAH AKDGKFDLHG LKEEAREWPG LEGMDLVPMV
TSSQRYTWDE TPWVWGEGFG RQDKPEFTVV AVDYGIKRNI LRLLAGEGCK ITVVPATTSA
EDILAMKPDG VFLSNGPGDP AETGKYAVPM IRKVIESGTP TFGICLGHQM LGLAVGAKTK
KMHQGHHGAN HPVRDETTGK VEITSMNHGF AVDEATLPKG AKQTHISLFD GSNCGIELEG
KPVFSVQYHP EASPGPRDSH YLFKRFAELM RENKRA
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