| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0848 |
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| Symbol | |
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| ID | 6183024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 728253 |
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| End bp | 729449 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671475 |
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| Product | carbamoyl-phosphate synthase, small subunit |
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| Protein accession | YP_001797664 |
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| Protein GI | 171463551 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.287672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCACCCT TGCTTCCTTC TTTTCCCCCA GCCGTGTTGG CTTTAGCCGA CGGCTCTATA
TTTCCCGGAT ATAGTATTGG CGCCCCTGGT GAAACTACTG GCGAAGTTGT CTTCAATACT
GCTTTGACTG GCTATCAAGA GATCATTACT GATCCTAGCT ACTCACGTCA AATAGTCACC
CTGACTTACC CACATATCGG CAATGTTGGC GTAAACGCCC AAGATGCAGA GTCTGATCGG
ATTCACGCGG CAGGATTGGT GGTTAAAGAT CTGCCCAAAC GTGTTTCTAG TTTTCGCTCA
GAAGGTGCTT TAGATGACTA CCTCACCAAG GCTGGCGTTC TGGGCATAGC AGGAATCGAT
ACGCGAAAAC TTACCAGAAT TCTTCGCGAT AAAGGCGCTC AATCAGGCGC GATTGTTGCT
GGCAAAGTAG GCGACAGTTA CGAGACCTTA GTTAGTAAAG CGCTTGAGCT TGCTAAAGCC
TTCCCAGGCA TGTCAGGCCT AGATCTTGCT AAAGTTGTTA CAACTCAGAA GGTTTATGAG
TGGCGAGAAG CTGAATGGAA TCTGCATGGT GCAGATGGCA AGCCTGCTTA CGGAACGTTA
GATACAGGCA AACCAATTAA TAAGGTTGTT GCTTATGATT TTGGAGTAAA GCGCAACATC
TTGCGTATGC TGACTGAACG GGGCTGTCAA TTAACCGTTG TGCCAGCCCA AACTACTGCA
GCAGAAGTAT TGGCAATGAA TCCAGACGGC GTATTTTTCT CAAATGGCCC CGGAGATCCT
GGACCATGTG ATTACGCAAT TGCAGCCGCA AAAGAAATTA TTGAAAAGGG TGTTCCTACC
TTTGGCATCT GTTTGGGCCA TCAAATCATG GGCCTTGCTG CAGGCGCTAA AACGTTAAAG
ATGAAGTTTG GTCACCATGG CGCAAACCAT CCTGTGAAAG ATTTGGATAC TGGTCGCGTG
GCAATTACCT CTCAGAACCA CGGGTTTGCT GTTGATGCTA ATACATTGCC AGACAATATC
CGTGTTACCC ATGTTTCTCT ATTTGATGGG TCTTTGCAGG GTTTGGCTTG GAAAGATAAG
CCGGAACTTT GTTTCCAAGG GCATCCAGAG GCGTCGCCTG GACCTCATGA CATAGCTTAT
TTATTTGATC GATTTGTGGA GCTCATGAAT GCTGCCAGCA AGAAGGAGGG CGAATAA
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| Protein sequence | MSPLLPSFPP AVLALADGSI FPGYSIGAPG ETTGEVVFNT ALTGYQEIIT DPSYSRQIVT
LTYPHIGNVG VNAQDAESDR IHAAGLVVKD LPKRVSSFRS EGALDDYLTK AGVLGIAGID
TRKLTRILRD KGAQSGAIVA GKVGDSYETL VSKALELAKA FPGMSGLDLA KVVTTQKVYE
WREAEWNLHG ADGKPAYGTL DTGKPINKVV AYDFGVKRNI LRMLTERGCQ LTVVPAQTTA
AEVLAMNPDG VFFSNGPGDP GPCDYAIAAA KEIIEKGVPT FGICLGHQIM GLAAGAKTLK
MKFGHHGANH PVKDLDTGRV AITSQNHGFA VDANTLPDNI RVTHVSLFDG SLQGLAWKDK
PELCFQGHPE ASPGPHDIAY LFDRFVELMN AASKKEGE
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