| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1019 |
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| Symbol | |
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| ID | 5053547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1018818 |
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| End bp | 1020011 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471186 |
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| Product | carbamoyl-phosphate synthase, small subunit |
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| Protein accession | YP_001155799 |
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| Protein GI | 145589202 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCACCCT TGCTTCCTTC TTTTCCTTTT GCCGTGTTGG CCTTAGCCGA CGGCTCTATA
TTTCACGGAT TTAGTATTGG CGCCCCTGGC GAAACTACCG GTGAAGTCGT TTTCAATACC
GCACTTACAG GCTATCAAGA GATCATTACT GATCCTAGCT ATTGTAGTCA AATAGTCACA
TTGACTTACC CTCACATCGG AAATGTCGGT GTAAATGCCC AGGATGCTGA GTCAGACCGG
ATTCATGCTG CAGGGCTTGT TATTAAAGAC TTGCCCAAGC GGGTTTCCAA TTTCCGCTCT
GAAGCTCCAT TAGATGCTTA TTTGACTGAA GCTGGTGTCG TCGGTATTGC GGGTATAGAT
ACTCGCAAGT TAACTAGAAT CCTTCGTGAT AAGGGCGCGC AGTCCGGCGC GATCGTTGCT
GGAAAAGCGG GTGATGATTA CGAAACCTTA GGTAAAAAAG CCTTAGAGCT AGTAAAGGCA
TTCCCGGGAA TGGCGGGCCT CGATTTAGCT AAGGTAGTTA CAACCAAAAA ACCATATGAG
TGGCGTGAGG GCGAGTGGGA CTTACATGGT CCAAATGGAA CCCCCGCTTA TAGAACTTTA
GATACAAGCA AGCCGACTTA TAAAGTGGTT GCCTATGATT TTGGCGTTAA GCGCAATATT
TTACGTATGC TCACAGAGCG CGGCTGTGAA TTAACTGTAG TTCCAGCACA AACTAGCGCA
GCTGAAGTTC TTGCCATGCA GCCTGATGGC GTATTTTTAT CAAACGGCCC CGGAGATCCA
GAGCCATGTG ATTACGCAAT TGCTGCTGCA AAAGAAATCA TTGAAGCTGG TGTCCCCACC
TTTGGGATTT GTTTAGGCCA TCAAATTATG GGTCTTGCTG CAGGCGCAAA AACATTAAAG
ATGAAGTTTG GTCACCATGG TGCAAACCAT CCTGTAAAAG ATTTGGATAC GGGGCGTGTA
GCTATCACTT CACAAAATCA CGGTTTTGCT GTTGATGCAA GTACATTGCC GGCAAACGTA
CGAGTAACGC ATGTTTCCTT ATTTGATGGT TCTTTACAAG GCCTAGCTTG GAAAGACAAG
CCTGCTATCT GTTTCCAGGG TCACCCTGAG GCCTCGCCTG GACCTCACGA CGTTTCCTAT
TTATTTGATC GTTTTATGGA GCTAATGAAT GCTGCCAAGA AGGAGGGCAA ATAA
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| Protein sequence | MSPLLPSFPF AVLALADGSI FHGFSIGAPG ETTGEVVFNT ALTGYQEIIT DPSYCSQIVT
LTYPHIGNVG VNAQDAESDR IHAAGLVIKD LPKRVSNFRS EAPLDAYLTE AGVVGIAGID
TRKLTRILRD KGAQSGAIVA GKAGDDYETL GKKALELVKA FPGMAGLDLA KVVTTKKPYE
WREGEWDLHG PNGTPAYRTL DTSKPTYKVV AYDFGVKRNI LRMLTERGCE LTVVPAQTSA
AEVLAMQPDG VFLSNGPGDP EPCDYAIAAA KEIIEAGVPT FGICLGHQIM GLAAGAKTLK
MKFGHHGANH PVKDLDTGRV AITSQNHGFA VDASTLPANV RVTHVSLFDG SLQGLAWKDK
PAICFQGHPE ASPGPHDVSY LFDRFMELMN AAKKEGK
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