Gene Cagg_2643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2643 
Symbol 
ID7269549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3239502 
End bp3240626 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content56% 
IMG OID643567469 
Productcarbamoyl-phosphate synthase, small subunit 
Protein accessionYP_002463948 
Protein GI219849515 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCAG TACTTGTGCT TGAAGATGGT CGTGTGTTTC CCGGTCGTTC GTTTGGTGCT 
CCCGGTGAGC GGATCGGTGA GGTGGTGTTT CACACCGGCA TGACCGGTTA CCAAGAGATT
CTGACCGATC CCTCTTACTG TGGTCAACTT GTCACGATGA CTGCGCCGCA TATTGGAAAT
ACCGGCGTCA ACGATTTTGA CCCTGAGTCG ATCCAGCCGC AAGTAGCGGG CTTTATCGTG
CGTAATTATA GCGAACACTA TAGTTCGTGG CGGGCCAGAG GGAGTCTTTC CCAGTTGTTG
CGTGACTACG GGATTGTCGC GATTAGCGAG GTCGATACAC GGGCCTTGAC GCGCCATATT
CGTACTGCCG GTGCGATGCG CGGGATTATC TCAACCACCG GCGAGTCGAT TGAAACCCTG
TTAGCAAAGT GTCGAGCTGC ACCACCGATG GAAGGGCAAG ACCTAACGCA GGTGGTGACT
TGTCCTGAAC CGTACCATTG GACAACGAAC AGTGAGCCGT TTACCCCGCC CTACCCCAAT
GGCCCCGCCA AAGAGCTTAC GTACCATGTG GTGGCTTACG ATTTTGGGAT CAAGCGCACC
ATCTTACGTC GCTTAGTCGA TCATGGTTGC CGGGTGACCG TCGTTCCGGC GACGACATCA
CCGGCTGAGG CGTTGGCGCT CCGGCCTGAT GGTATCTTCT TCTCAAACGG GCCGGGTGAT
CCGGCGGCGG CGACCTATGC GGTGGCGACG TTGCGCGCGT TGCTGGGTAA ATTGCCGATC
TTCGGTATCT GTCTCGGTCA CCAACTGATG GGGCTGGCAT TAGGTGGACG CACGTACAAG
TTGCCGTTCG GTCATCACGG GGCGAACCAT CCGGTACGCT ATCTGCCAAC GGGGCGGGTG
GAGATTACCT CGCAAAATCA CGGCTTTGCA GTTGATCTGG ATTCGTTGCC GGCAGGCGTT
GAATTGACCC ACATCAACCT GAACGATCAG ACGTTGGAAG GGTTTAGCTA TCCAGAACTG
CATTGCTTCA GTGTACAGTA TCACCCTGAA GCCGGGCCGG GTCCACACGA TGCGACCTAT
CTCTTTGCTC AGTTTACCGC GATGATGGCT GCTGCGAAGC GGTAG
 
Protein sequence
MDAVLVLEDG RVFPGRSFGA PGERIGEVVF HTGMTGYQEI LTDPSYCGQL VTMTAPHIGN 
TGVNDFDPES IQPQVAGFIV RNYSEHYSSW RARGSLSQLL RDYGIVAISE VDTRALTRHI
RTAGAMRGII STTGESIETL LAKCRAAPPM EGQDLTQVVT CPEPYHWTTN SEPFTPPYPN
GPAKELTYHV VAYDFGIKRT ILRRLVDHGC RVTVVPATTS PAEALALRPD GIFFSNGPGD
PAAATYAVAT LRALLGKLPI FGICLGHQLM GLALGGRTYK LPFGHHGANH PVRYLPTGRV
EITSQNHGFA VDLDSLPAGV ELTHINLNDQ TLEGFSYPEL HCFSVQYHPE AGPGPHDATY
LFAQFTAMMA AAKR