| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0009 |
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| Symbol | |
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| ID | 4460158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 13077 |
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| End bp | 14252 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639700762 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_844148 |
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| Protein GI | 116747461 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.35972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCTC CATGGAAAAG AAACAGTGCC CTGCTGCTGC TTGAGGACGG CACCGTGTTT
CGAGGCTACG CTTTTGCCGG CGGCGGAAGA GCGCTGGGCG AGGTGGTTTT CAACACCAGC
ATGACCGGCT ACCAGGAAGT GCTCACCGAT CCCTCCTACA AGGGTCAGAT GGTGACGATG
ACCTATCCCT TGACCGGCGC GTACGGGATC AACGACGAGG ACATGGAATC CGCCGCCGTC
CAGGTCGAGG CTTTCATCGT AAAGGAGTAC CAGGAATTTC CGAGCAACTG GAGGAGCAAT
CGAAGCCTTG CCGATTTTCT CAACGAATAC AATAAGATCG GGATAGAAGG CATCGACACT
CGGGCCTTGA CGCGACACAT TCGCATGGGT GGGGCCATGC GCGGGATCAT CGCCACGGAC
ACCGACAACG TGAAGGAACT GATGGAAGAG GTGCAGGCGT ACCCGGGGCT GAACGGAATC
GACCTGGTCA AAACGGTCAC CTGCTCGAAG CCCTACCTCT GGCGCACGGG CGTAAAACCC
GGCACCCTGG AGCCGAAATG GCCGGAAAAC CGGCCGGAGC TGAGGGTGGC CGCCATCGAC
TGCGGCGTGA AGTACAACAT CCTGCGCAAG CTGGAAGCGT CGGGGTGCCA GGTCATGGTG
TTTCCGGCAC ACGTTTCCGC GCGGGAAATC GCCGCCTGCA AACCGGACGG CGTTTTTTTG
TCCAACGGTC CCGGGGACCC CTCGGCCGTC GGCTACGTCA TCGAAACGGT TCGGAGTCTT
CTGGGAGAAA AGCCGGTCTT CGGCATCTGC CTGGGTCACC AGATGATGGG CCTGGCCCTC
GGGGGACGGA CCTTCAAATT GAAATTCGGC CACCGCGGCG GCAATCAACC GGTCAAAGAC
GTCACGACGG GCAAGGTCGA GATCACTTCT CAAAATCACG GCTACTGCGT GGACATCGAT
TCGCTCGGAA ACGTCCCGGT CAAGCTCACG CACGTGAACC TCAACGACAA CACCCTGGAG
GGCATGGAAC ACCTGGAAAT CCCGGCATTC AGCGTTCAGT ATCACCCCGA AGCGTCGCCC
GGGCCTCATG ACGCTTCCTA CCTGTTCGAC CGTTTTGTTC GACTCATGCA AGGACCCGAA
CGCGGGCACG GCGCATCGGC ACCCAGAGGC CGCTGA
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| Protein sequence | MTSPWKRNSA LLLLEDGTVF RGYAFAGGGR ALGEVVFNTS MTGYQEVLTD PSYKGQMVTM
TYPLTGAYGI NDEDMESAAV QVEAFIVKEY QEFPSNWRSN RSLADFLNEY NKIGIEGIDT
RALTRHIRMG GAMRGIIATD TDNVKELMEE VQAYPGLNGI DLVKTVTCSK PYLWRTGVKP
GTLEPKWPEN RPELRVAAID CGVKYNILRK LEASGCQVMV FPAHVSAREI AACKPDGVFL
SNGPGDPSAV GYVIETVRSL LGEKPVFGIC LGHQMMGLAL GGRTFKLKFG HRGGNQPVKD
VTTGKVEITS QNHGYCVDID SLGNVPVKLT HVNLNDNTLE GMEHLEIPAF SVQYHPEASP
GPHDASYLFD RFVRLMQGPE RGHGASAPRG R
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