| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0960 |
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| Symbol | |
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| ID | 3969723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1054093 |
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| End bp | 1055283 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924076 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_530849 |
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| Protein GI | 90422479 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0203745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCCT CAGAAACCAA CAAAGCCTGG CCGGACCACA AACCGACCGC GCTCCTCGTG
CTTGCCGACG GCACCGTGTT CGAGGGCTTC GGCCTCGGCG CGGAGGGCCA TGCGGTCGGC
GAAGTCTGCT TCAACACCGC GATGACCGGC TATGAGGAGA TCCTCACCGA TCCGTCCTAT
GCCGGGCAAT TGATCACCTT CACCTTCCCG CATATCGGCA ATGTCGGCAC CAACGACGAC
GACATCGAGA CCGTGAACAT GGCGGCGACG CCGGGCGCCC GCGGGGTGAT CCTGCGCGCC
GCGATCACCG ATCCGTCGAA TTATCGCTCC TCGCGCCATC TCGACGCCTG GCTGAAGGCC
CGCGGCATCA TCGGCCTGTC CGGCATCGAC ACCCGCGCGC TGACCGCGCT GATCCGCAGC
AAGGGCATGC CCAACGCGGT GATCGCGCAC GCCCGCAACG GCGAATTCGA GCTGCACGCG
CTGAAGGAAG AAGCCCGCGA ATGGCCCGGC CTCGAGGGCA TGGACCTGGT GCCGATGGTC
ACCTCCGGGC AGCGCTTCAC CTGGGACGAG ACGCCGTGGA TCTGGAACGA GGGTTTCGGC
CAACAGACCG CGCCGGAATT CAACGTGGTG GCGATCGATT ACGGCATCAA GCGCAACATT
TTGCGATTGC TCGCCGGTGA AGGCTGCAAG GTCACCGTGG TGCCGGCGAC CACCTCGTCG
GAAGACATTC TGGCGATGAA GCCCGACGGC GTGTTCCTGT CGAACGGCCC CGGCGATCCG
GCGGCGACCG GCAAATATGC CGTGCCGGTG ATCAAGGACG TGATCGCCTC GGGCGTGCCG
ACCTTCGGCA TCTGCCTCGG CCACCAGATG CTGGGTCTCG CGCTCGGCGG CAAGACCGTA
AAGATGCATC AGGGCCATCA CGGCGCCAAC CATCCGGTCA AGGACATCAC CACCGGCAAG
GTGGAGATCA CCTCGATGAA CCACGGCTTC GCGGTCGACA AGACCACGCT GCCGGGCAAC
GTGCAGCAGA CCCACGTCTC GCTGTTCGAT GACAGCAATT GCGGCATCGC GCTCGCCGAC
AAGCCGGTGT TCTCGGTGCA GTACCACCCC GAGGCCTCGC CCGGCCCGCG GGATTCGCAC
TACCTGTTCA AGCGCTTCGC CGATCTGATG CGGGCGAAGA AGAGCGCGTA G
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| Protein sequence | MTASETNKAW PDHKPTALLV LADGTVFEGF GLGAEGHAVG EVCFNTAMTG YEEILTDPSY
AGQLITFTFP HIGNVGTNDD DIETVNMAAT PGARGVILRA AITDPSNYRS SRHLDAWLKA
RGIIGLSGID TRALTALIRS KGMPNAVIAH ARNGEFELHA LKEEAREWPG LEGMDLVPMV
TSGQRFTWDE TPWIWNEGFG QQTAPEFNVV AIDYGIKRNI LRLLAGEGCK VTVVPATTSS
EDILAMKPDG VFLSNGPGDP AATGKYAVPV IKDVIASGVP TFGICLGHQM LGLALGGKTV
KMHQGHHGAN HPVKDITTGK VEITSMNHGF AVDKTTLPGN VQQTHVSLFD DSNCGIALAD
KPVFSVQYHP EASPGPRDSH YLFKRFADLM RAKKSA
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