More than 300 homologs were found in PanDaTox collection
for query gene PMN2A_0259 on replicon NC_007335
Organism: Prochlorococcus marinus str. NATL2A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008819  NATL1_09281  carbamoyl phosphate synthase small subunit  98.44 
 
 
384 aa  775    Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.87193  normal  0.0301636 
 
 
-
 
NC_007335  PMN2A_0259  carbamoyl phosphate synthase small subunit  100 
 
 
384 aa  790    Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_15771  carbamoyl phosphate synthase small subunit  64.47 
 
 
379 aa  524  1e-147  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  63.17 
 
 
386 aa  513  1e-144  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_009976  P9211_06931  carbamoyl phosphate synthase small subunit  61.84 
 
 
380 aa  509  1e-143  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.0298336  normal  0.187512 
 
 
-
 
NC_007513  Syncc9902_1307  carbamoyl phosphate synthase small subunit  62.57 
 
 
398 aa  507  9.999999999999999e-143  Synechococcus sp. CC9902  Bacteria  normal  0.786161  n/a   
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  59.52 
 
 
379 aa  468  1.0000000000000001e-131  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_09071  carbamoyl phosphate synthase small subunit  58.71 
 
 
379 aa  463  1e-129  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  57.37 
 
 
379 aa  452  1.0000000000000001e-126  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_007577  PMT9312_0848  carbamoyl phosphate synthase small subunit  56.57 
 
 
379 aa  449  1e-125  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  57.55 
 
 
380 aa  441  9.999999999999999e-123  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  57.55 
 
 
380 aa  441  9.999999999999999e-123  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  54.47 
 
 
391 aa  429  1e-119  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  55.85 
 
 
384 aa  431  1e-119  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  56.58 
 
 
379 aa  426  1e-118  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  55.2 
 
 
389 aa  424  1e-117  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  53.21 
 
 
385 aa  409  1e-113  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  54.47 
 
 
388 aa  406  1.0000000000000001e-112  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  51.32 
 
 
386 aa  377  1e-103  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  50.79 
 
 
386 aa  376  1e-103  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  49.87 
 
 
376 aa  369  1e-101  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  47.86 
 
 
372 aa  363  3e-99  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  46.97 
 
 
383 aa  362  4e-99  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  49.47 
 
 
374 aa  358  7e-98  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  48.15 
 
 
391 aa  355  8.999999999999999e-97  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  48 
 
 
373 aa  353  2e-96  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  47.76 
 
 
373 aa  353  2e-96  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  48 
 
 
373 aa  353  4e-96  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  47.88 
 
 
393 aa  349  5e-95  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0542874 
 
 
-
 
NC_009483  Gura_1858  carbamoyl phosphate synthase small subunit  47.73 
 
 
373 aa  347  2e-94  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  47.35 
 
 
380 aa  347  3e-94  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2527  carbamoyl phosphate synthase small subunit  50 
 
 
373 aa  346  5e-94  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1771  carbamoyl phosphate synthase small subunit  47.88 
 
 
374 aa  343  2.9999999999999997e-93  Geobacter metallireducens GS-15  Bacteria  normal  0.0224697  normal  0.089739 
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  47.33 
 
 
373 aa  343  2.9999999999999997e-93  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  47.87 
 
 
367 aa  343  4e-93  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2083  carbamoyl phosphate synthase small subunit  49.47 
 
 
373 aa  342  7e-93  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1273  carbamoyl phosphate synthase small subunit  48.29 
 
 
374 aa  342  8e-93  Geobacter sulfurreducens PCA  Bacteria  normal  0.0567002  n/a   
 
 
-
 
NC_009719  Plav_2314  carbamoyl-phosphate synthase, small subunit  47.64 
 
 
402 aa  341  1e-92  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.0322598 
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  47.84 
 
 
359 aa  340  2e-92  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  47.35 
 
 
372 aa  339  4e-92  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I0585  carbamoyl phosphate synthase small subunit  47.38 
 
 
384 aa  337  9.999999999999999e-92  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0152244  n/a   
 
 
-
 
NC_009457  VC0395_A1968  carbamoyl phosphate synthase small subunit  47.64 
 
 
379 aa  338  9.999999999999999e-92  Vibrio cholerae O395  Bacteria  normal  0.837999  n/a   
 
 
-
 
NC_013173  Dbac_0133  carbamoyl-phosphate synthase, small subunit  47.62 
 
 
378 aa  337  2.9999999999999997e-91  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  45.7 
 
 
359 aa  337  2.9999999999999997e-91  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  46.58 
 
 
369 aa  337  2.9999999999999997e-91  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  46.38 
 
 
358 aa  336  3.9999999999999995e-91  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_010717  PXO_00088  carbamoyl phosphate synthase small subunit  45.99 
 
 
390 aa  336  3.9999999999999995e-91  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.562291  n/a   
 
 
-
 
NC_008686  Pden_2165  carbamoyl phosphate synthase small subunit  44.88 
 
 
382 aa  336  5e-91  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3210  carbamoyl-phosphate synthase, small subunit  44.65 
 
 
405 aa  335  7.999999999999999e-91  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.295908 
 
 
-
 
NC_011004  Rpal_1470  carbamoyl phosphate synthase small subunit  45.34 
 
 
397 aa  335  1e-90  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00912  carbamoyl phosphate synthase small subunit  47.76 
 
 
416 aa  335  1e-90  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  45.79 
 
 
369 aa  334  1e-90  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_012918  GM21_2310  carbamoyl phosphate synthase small subunit  47.62 
 
 
374 aa  334  1e-90  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013456  VEA_004479  carbamoyl-phosphate synthase small chain  47.59 
 
 
379 aa  334  1e-90  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1898  carbamoyl phosphate synthase small subunit  47.62 
 
 
374 aa  334  1e-90  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0896  carbamoyl-phosphate synthase, small subunit  46.42 
 
 
378 aa  334  1e-90  Psychromonas ingrahamii 37  Bacteria  normal  0.348294  normal  0.560722 
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  46.05 
 
 
381 aa  334  2e-90  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  46.05 
 
 
381 aa  334  2e-90  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2885  carbamoyl-phosphate synthase small subunit  44.85 
 
 
389 aa  333  2e-90  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  46.58 
 
 
381 aa  334  2e-90  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_007778  RPB_4142  carbamoyl phosphate synthase small subunit  45.34 
 
 
397 aa  334  2e-90  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.164526  normal 
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  46.4 
 
 
356 aa  333  3e-90  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_13220  carbamoyl-phosphate synthase small subunit  43.35 
 
 
467 aa  333  3e-90  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.363669  normal  0.801105 
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  45.79 
 
 
381 aa  333  4e-90  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  45.79 
 
 
381 aa  333  4e-90  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  45.79 
 
 
381 aa  333  4e-90  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  45.79 
 
 
381 aa  333  4e-90  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  45.79 
 
 
381 aa  332  5e-90  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3404  carbamoyl phosphate synthase small subunit  46.83 
 
 
385 aa  332  6e-90  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000786314 
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  45 
 
 
357 aa  332  6e-90  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0591  carbamoyl phosphate synthase small subunit  46.03 
 
 
382 aa  332  6e-90  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2215  carbamoyl-phosphate synthase, small subunit  47.12 
 
 
381 aa  332  6e-90  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000311671  n/a   
 
 
-
 
NC_013037  Dfer_4372  carbamoyl phosphate synthase small subunit  45.29 
 
 
368 aa  332  7.000000000000001e-90  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3986  carbamoyl phosphate synthase small subunit  45.08 
 
 
397 aa  332  9e-90  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1519  carbamoyl phosphate synthase small subunit  47.48 
 
 
378 aa  331  1e-89  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1322  carbamoyl-phosphate synthase, small subunit  44.25 
 
 
414 aa  332  1e-89  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.125881 
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  43.85 
 
 
361 aa  331  1e-89  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  46.88 
 
 
369 aa  331  2e-89  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_007510  Bcep18194_A4432  carbamoyl phosphate synthase small subunit  46.19 
 
 
380 aa  330  2e-89  Burkholderia sp. 383  Bacteria  hitchhiker  0.00120805  normal 
 
 
-
 
NC_007925  RPC_0960  carbamoyl phosphate synthase small subunit  44.82 
 
 
396 aa  330  2e-89  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0203745 
 
 
-
 
NC_009379  Pnuc_1019  carbamoyl-phosphate synthase, small subunit  44.47 
 
 
397 aa  330  2e-89  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  47.48 
 
 
366 aa  330  2e-89  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4526  carbamoyl-phosphate synthase, small subunit  44.91 
 
 
405 aa  330  2e-89  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.717788  n/a   
 
 
-
 
NC_012793  GWCH70_1046  carbamoyl phosphate synthase small subunit  44.77 
 
 
364 aa  330  3e-89  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3203  carbamoyl-phosphate synthase, small subunit  48.02 
 
 
368 aa  329  4e-89  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0698  carbamoyl-phosphate synthase, small subunit  45.24 
 
 
377 aa  329  4e-89  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.110228 
 
 
-
 
NC_009428  Rsph17025_0661  carbamoyl phosphate synthase small subunit  46.63 
 
 
387 aa  328  9e-89  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.693727  normal  0.143114 
 
 
-
 
NC_007406  Nwi_2446  carbamoyl phosphate synthase small subunit  45.1 
 
 
396 aa  328  1.0000000000000001e-88  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.505949  normal  0.289169 
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  45.48 
 
 
371 aa  328  1.0000000000000001e-88  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_009952  Dshi_2387  carbamoyl phosphate synthase small subunit  45.14 
 
 
389 aa  327  1.0000000000000001e-88  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0953377  normal  0.858607 
 
 
-
 
NC_009972  Haur_4242  carbamoyl-phosphate synthase, small subunit  44.44 
 
 
376 aa  328  1.0000000000000001e-88  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2263  carbamoyl phosphate synthase small subunit  45.34 
 
 
420 aa  328  1.0000000000000001e-88  Arthrobacter sp. FB24  Bacteria  normal  0.181479  n/a   
 
 
-
 
NC_012917  PC1_3648  carbamoyl phosphate synthase small subunit  45.55 
 
 
382 aa  327  2.0000000000000001e-88  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.48497  n/a   
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  46.3 
 
 
381 aa  327  2.0000000000000001e-88  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
NC_013159  Svir_15580  carbamoyl-phosphate synthase small subunit  45.67 
 
 
378 aa  327  2.0000000000000001e-88  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3359  carbamoyl-phosphate synthase, small subunit  45.09 
 
 
381 aa  327  2.0000000000000001e-88  Marinobacter aquaeolei VT8  Bacteria  normal  0.365692  n/a   
 
 
-
 
NC_004347  SO_1141  carbamoyl phosphate synthase small subunit  45.77 
 
 
386 aa  327  3e-88  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012856  Rpic12D_1728  carbamoyl phosphate synthase small subunit  46.13 
 
 
378 aa  327  3e-88  Ralstonia pickettii 12D  Bacteria  normal  0.590257  normal  0.961099 
 
 
-
 
NC_013223  Dret_1071  carbamoyl-phosphate synthase, small subunit  45.68 
 
 
369 aa  326  4.0000000000000003e-88  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0749952  normal  0.228018 
 
 
-
 
NC_009654  Mmwyl1_4035  carbamoyl phosphate synthase small subunit  45.77 
 
 
396 aa  326  5e-88  Marinomonas sp. MWYL1  Bacteria  normal  0.311643  normal 
 
 
-
 
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