| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1046 |
|---|
| Symbol | |
|---|
| ID | 7979187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 1096462 |
|---|
| End bp | 1097556 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644797999 |
|---|
| Product | carbamoyl phosphate synthase small subunit |
|---|
| Protein accession | YP_002949172 |
|---|
| Protein GI | 239826548 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
|---|
| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGC AGCTTGTATT AGAAGACGGT ACGTTTTTTA TCGGCGACGC GTTTGGCAGC
ACGGAAAAAA TGGTTGGAGA AGTGGTGTTT AACACGGGAA TGACCGGTTA TCAAGAAATT
TTAACCGATC CTTCTTATTG CGGACAAATT GTAACAATGA CGTATCCGCT CATCGGCAAT
TATGGCATTA ATCACGATGA TTTTGAATCG ATTGAACCGC ATGTTCATGG CTTCATTGTT
AAAGAAGTGT GCGACTCACC ATCCAATTGG CGAAACGAAA TGACGCTCGA TCAGTATTTA
AAAGAAAAAC GGATCCCGGG GTTATCAGGA ATCGATACGC GAAAATTAAC GAGGATTATT
CGAAAATATG GCACGCTCAA AGGAATGATC TGCGATTTAG ATGCAAGCGT GCAAGAGGTT
GTCGAATACT TGAAAACAAC GGAACTGCCG AGAGATCAAG TGAAGCGCGT CTCGACAAAA
AGCCCGTATC CAAGCCCGGG GCGAGGCTAT CGCATCGTCC TCGTTGATTT CGGCATGAAA
CATGGCATTT TGCGCGAATT AAATAAACGA AATTGCGATG TGATTGTGCT TCCATATAAC
GCGACCGAGG AAGATGTATT ACGTTTGCAC CCGGACGGAG TAATGTTATC AAACGGTCCT
GGAGACCCGA AAGATGTGCC GGAAGCGATC GAAATGATTC GAGGCATTCT CGGCAAAGTG
CCGCTCTTTG GCATCTGCCT CGGCCATCAG CTGTTCGCGC TCGCCTGTGG CGCCGATACG
GAAAAAATGA AATTCGGCCA TCGCGGCTCA AATCATCCAG TGAAGCATTT GGCGACGGGA
AAAGTAGCGA TCACTTCACA AAATCATAGC TATACTGTCA AAAAAGAATC ATTGCAACAT
ACAAGATTAG AAGTAACCCA TATCGCTTTA AACGACGGCA CGGTAGAAGG ATTGCGGCAT
CTTGATTATC CGGCGTTTAC GGTGCAATAC CACCCGGAAG CCTCACCTGG TCCTGAGGAT
GATAACTCGT TATTTGATGA GTTTATTGAG ATGATTCGCG AGTTTAAAAA GAAAGGGGAA
ATCGTTCATG CCTAA
|
|---|
| Protein sequence | MKRQLVLEDG TFFIGDAFGS TEKMVGEVVF NTGMTGYQEI LTDPSYCGQI VTMTYPLIGN
YGINHDDFES IEPHVHGFIV KEVCDSPSNW RNEMTLDQYL KEKRIPGLSG IDTRKLTRII
RKYGTLKGMI CDLDASVQEV VEYLKTTELP RDQVKRVSTK SPYPSPGRGY RIVLVDFGMK
HGILRELNKR NCDVIVLPYN ATEEDVLRLH PDGVMLSNGP GDPKDVPEAI EMIRGILGKV
PLFGICLGHQ LFALACGADT EKMKFGHRGS NHPVKHLATG KVAITSQNHS YTVKKESLQH
TRLEVTHIAL NDGTVEGLRH LDYPAFTVQY HPEASPGPED DNSLFDEFIE MIREFKKKGE
IVHA
|
|---|
| |