| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004479 |
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| Symbol | |
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| ID | 8558247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3201021 |
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| End bp | 3202160 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407608 |
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| Product | carbamoyl-phosphate synthase small chain |
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| Protein accession | YP_003287102 |
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| Protein GI | 262395248 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGTAAAT TAGCACTGTT AGTCCTAGAA GATGGGACAG TGTTCCACGG AGTGTCCATA
GGGGCAGATG GTATTTCCGT TGGTGAAGTC GTTTTTAATA CCTCGATGAC GGGGTATCAA
GAAATCCTCA CTGATCCTTC CTATTCTCAG CAAATCGTCA CCCTTACTTA TCCTCACATT
GGCAATACCG GAACCACTTC CGAAGATGAA GAATCCTCTT CCATTCATGC ACAAGGCCTT
GTGATTCGCG ATCTTCCTCT TATCGCTTCT AACTTCCGTA ATGAACAATC CCTCTCTGAT
TACCTTAAGT CTCAAAATAT CGTTGGCATC GCTGATATTG ATACGCGAAA GCTCACTCGT
ATCTTGCGTG AAAAAGGTGC TCAAAACGGT TGTATTTTTG CGGGTAATAA CCTAGATGAA
GCTTTGGCTC TAGCGAAAGC AAAAGAATTC CCAGGCTTAA AAGGAATGGA CCTTGCAAAA
GAAGTTACAA CGAAAGAAGC GTATCAATGG AAACAAGGTT CGTGGACGCT TGAAGGTGGA
CTTCCAGAGG CGAAAGATGA CAGCGAGCTG CCATACCACG TCGTTGCTTA CGACTTCGGC
GCAAAACGCA ACATCCTACG AATGTTGGTT GACCGCGGTT GCCGCTTAAC GGTTGTTCCT
GCTGAAACGT CAGCGGAAGA AGTGCTTGCG ATGAACCCGG ACGGTGTTTT CCTATCAAAT
GGCCCTGGTG ATCCAGAACC ATGTACTTAC GCGATTGAAG CGACAAAAGT ATTCCTAGAA
AAAGGCTTAC CTATCTTCGG TATCTGTTTA GGTCACCAAA TCCTTGCGTT AGCGTCAGGT
GCACAAACCG TGAAAATGAA GTTTGGTCAC CATGGTGCAA ACCACCCAGT AAAAGATTTA
GAGCGTAACG TTGTTATGAT CACTTCGCAA AACCACGGCT TTGCGGCAGA TGAAGCAACG
TTACCGGAAA ACTTACGTGC TACTCACGTA TCGTTATTTG ATGGCTCTTT GCAAGGTATT
CACCGCACAG ACAAGCCAGC ATTTAGCTTC CAAGGTCACC CAGAAGCGAG CCCAGGTCCA
CATGACGCGG CACCGCTATT TGACCACTTT ATCGAACTAA TCAAAAAACA CAGCGCTTAA
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| Protein sequence | MGKLALLVLE DGTVFHGVSI GADGISVGEV VFNTSMTGYQ EILTDPSYSQ QIVTLTYPHI
GNTGTTSEDE ESSSIHAQGL VIRDLPLIAS NFRNEQSLSD YLKSQNIVGI ADIDTRKLTR
ILREKGAQNG CIFAGNNLDE ALALAKAKEF PGLKGMDLAK EVTTKEAYQW KQGSWTLEGG
LPEAKDDSEL PYHVVAYDFG AKRNILRMLV DRGCRLTVVP AETSAEEVLA MNPDGVFLSN
GPGDPEPCTY AIEATKVFLE KGLPIFGICL GHQILALASG AQTVKMKFGH HGANHPVKDL
ERNVVMITSQ NHGFAADEAT LPENLRATHV SLFDGSLQGI HRTDKPAFSF QGHPEASPGP
HDAAPLFDHF IELIKKHSA
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